Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.64□□□□□ -0.07
Fdft1P53798 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.64□□□□□ -0.07
Fdft1P53798 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.64□□□□□ -0.07
Fdft1P53798 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.64□□□□□ -0.07
Fdft1P53798 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.64□□□□□ -0.07
Fdft1P53798 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.64□□□□□ -0.07
Fdft1P53798 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Fdft1P53798 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Fdft1P53798 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Fdft1P53798 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Fdft1P53798 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Fdft1P53798 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Fdft1P53798 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Fdft1P53798 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Fdft1P53798 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Fdft1P53798 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Fdft1P53798 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fdft1P53798 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fdft1P53798 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fdft1P53798 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fdft1P53798 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fdft1P53798 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.63□□□□□ -0.07
Fdft1P53798 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Fdft1P53798 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Fdft1P53798 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Fdft1P53798 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Fdft1P53798 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fdft1P53798 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Fdft1P53798 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Fdft1P53798 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fdft1P53798 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.63□□□□□ -0.07
Fdft1P53798 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Fdft1P53798 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Fdft1P53798 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.63□□□□□ -0.07
Fdft1P53798 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fdft1P53798 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.63□□□□□ -0.07
Fdft1P53798 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Fdft1P53798 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fdft1P53798 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fdft1P53798 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fdft1P53798 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Fdft1P53798 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Fdft1P53798 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Fdft1P53798 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fdft1P53798 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fdft1P53798 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fdft1P53798 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fdft1P53798 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.63□□□□□ -0.07
Fdft1P53798 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Fdft1P53798 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fdft1P53798 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Fdft1P53798 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fdft1P53798 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fdft1P53798 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fdft1P53798 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fdft1P53798 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fdft1P53798 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fdft1P53798 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Fdft1P53798 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Fdft1P53798 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.62□□□□□ -0.07
Fdft1P53798 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Fdft1P53798 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Fdft1P53798 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.62□□□□□ -0.07
Fdft1P53798 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.62□□□□□ -0.07
Fdft1P53798 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fdft1P53798 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fdft1P53798 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fdft1P53798 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fdft1P53798 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fdft1P53798 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Fdft1P53798 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.62□□□□□ -0.07
Fdft1P53798 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Fdft1P53798 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fdft1P53798 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fdft1P53798 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.62□□□□□ -0.07
Fdft1P53798 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Fdft1P53798 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.62□□□□□ -0.07
Fdft1P53798 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fdft1P53798 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fdft1P53798 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fdft1P53798 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fdft1P53798 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Fdft1P53798 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Fdft1P53798 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fdft1P53798 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fdft1P53798 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fdft1P53798 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Fdft1P53798 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fdft1P53798 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fdft1P53798 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fdft1P53798 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Fdft1P53798 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Fdft1P53798 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fdft1P53798 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fdft1P53798 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.61□□□□□ -0.07
Fdft1P53798 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Fdft1P53798 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.61□□□□□ -0.07
Fdft1P53798 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.61□□□□□ -0.07
Fdft1P53798 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fdft1P53798 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms