Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox1P53783 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox1P53783 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox1P53783 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox1P53783 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sox1P53783 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox1P53783 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox1P53783 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox1P53783 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox1P53783 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Sox1P53783 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.86□□□□□ -0.03
Sox1P53783 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Sox1P53783 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox1P53783 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sox1P53783 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox1P53783 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox1P53783 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Sox1P53783 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.85□□□□□ -0.03
Sox1P53783 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox1P53783 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox1P53783 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.85□□□□□ -0.03
Sox1P53783 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox1P53783 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.85□□□□□ -0.03
Sox1P53783 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox1P53783 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Sox1P53783 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.85□□□□□ -0.03
Sox1P53783 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox1P53783 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox1P53783 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.85□□□□□ -0.03
Sox1P53783 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox1P53783 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Sox1P53783 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox1P53783 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sox1P53783 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sox1P53783 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox1P53783 Gm37444-201ENSMUST00000193605 439 ntBASIC14.85□□□□□ -0.03
Sox1P53783 Gm19184-201ENSMUST00000196798 928 ntBASIC14.85□□□□□ -0.03
Sox1P53783 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sox1P53783 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.85□□□□□ -0.03
Sox1P53783 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sox1P53783 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Sox1P53783 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox1P53783 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox1P53783 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Sox1P53783 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox1P53783 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Sox1P53783 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox1P53783 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox1P53783 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.85□□□□□ -0.03
Sox1P53783 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox1P53783 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Sox1P53783 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox1P53783 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox1P53783 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox1P53783 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sox1P53783 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.84□□□□□ -0.03
Sox1P53783 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.84□□□□□ -0.03
Sox1P53783 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox1P53783 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox1P53783 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Sox1P53783 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Sox1P53783 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sox1P53783 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Sox1P53783 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox1P53783 Gm13342-201ENSMUST00000121055 207 ntBASIC14.84□□□□□ -0.03
Sox1P53783 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Sox1P53783 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.84□□□□□ -0.03
Sox1P53783 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Sox1P53783 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sox1P53783 Gm27341-201ENSMUST00000183570 106 ntBASIC14.84□□□□□ -0.03
Sox1P53783 Gm19309-201ENSMUST00000218295 205 ntBASIC14.84□□□□□ -0.03
Sox1P53783 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox1P53783 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox1P53783 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Sox1P53783 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox1P53783 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox1P53783 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Sox1P53783 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.84□□□□□ -0.03
Sox1P53783 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.84□□□□□ -0.03
Sox1P53783 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox1P53783 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.84□□□□□ -0.03
Sox1P53783 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox1P53783 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox1P53783 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sox1P53783 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox1P53783 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.84□□□□□ -0.03
Sox1P53783 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox1P53783 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sox1P53783 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
Sox1P53783 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Sox1P53783 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Sox1P53783 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sox1P53783 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sox1P53783 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sox1P53783 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.83□□□□□ -0.03
Sox1P53783 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sox1P53783 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox1P53783 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sox1P53783 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox1P53783 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms