Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-1P50220 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.16□□□□□ -0.46
Nkx2-1P50220 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-1P50220 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-1P50220 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-1P50220 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-1P50220 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-1P50220 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-1P50220 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-1P50220 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-1P50220 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-1P50220 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.15□□□□□ -0.46
Nkx2-1P50220 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.15□□□□□ -0.46
Nkx2-1P50220 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-1P50220 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-1P50220 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.15□□□□□ -0.46
Nkx2-1P50220 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Nkx2-1P50220 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Nkx2-1P50220 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-1P50220 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.15□□□□□ -0.46
Nkx2-1P50220 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Nkx2-1P50220 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-1P50220 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-1P50220 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.15□□□□□ -0.46
Nkx2-1P50220 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-1P50220 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.15□□□□□ -0.46
Nkx2-1P50220 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-1P50220 Gm27357-201ENSMUST00000183754 135 ntBASIC12.15□□□□□ -0.46
Nkx2-1P50220 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.15□□□□□ -0.46
Nkx2-1P50220 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.15□□□□□ -0.46
Nkx2-1P50220 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-1P50220 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-1P50220 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-1P50220 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-1P50220 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-1P50220 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.15□□□□□ -0.46
Nkx2-1P50220 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Nkx2-1P50220 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-1P50220 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-1P50220 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-1P50220 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.15□□□□□ -0.46
Nkx2-1P50220 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-1P50220 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-1P50220 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Nkx2-1P50220 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nkx2-1P50220 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nkx2-1P50220 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Nkx2-1P50220 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nkx2-1P50220 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.14□□□□□ -0.47
Nkx2-1P50220 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Gm43767-201ENSMUST00000198933 381 ntBASIC12.14□□□□□ -0.47
Nkx2-1P50220 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-1P50220 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-1P50220 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.13□□□□□ -0.47
Nkx2-1P50220 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-1P50220 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-1P50220 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-1P50220 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-1P50220 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-1P50220 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-1P50220 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Nkx2-1P50220 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-1P50220 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-1P50220 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Nkx2-1P50220 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.13□□□□□ -0.47
Nkx2-1P50220 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms