Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.19□□□□□ -0.14
Hnf4aP49698 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hnf4aP49698 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Hnf4aP49698 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hnf4aP49698 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Hnf4aP49698 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hnf4aP49698 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hnf4aP49698 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hnf4aP49698 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hnf4aP49698 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hnf4aP49698 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hnf4aP49698 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Hnf4aP49698 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hnf4aP49698 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hnf4aP49698 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hnf4aP49698 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Hnf4aP49698 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hnf4aP49698 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hnf4aP49698 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hnf4aP49698 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hnf4aP49698 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hnf4aP49698 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.18□□□□□ -0.14
Hnf4aP49698 Gm8749-201ENSMUST00000117737 331 ntBASIC14.18□□□□□ -0.14
Hnf4aP49698 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Hnf4aP49698 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hnf4aP49698 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hnf4aP49698 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hnf4aP49698 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.18□□□□□ -0.14
Hnf4aP49698 Thap2-203ENSMUST00000218989 527 ntBASIC14.18□□□□□ -0.14
Hnf4aP49698 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hnf4aP49698 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hnf4aP49698 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Hnf4aP49698 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hnf4aP49698 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hnf4aP49698 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hnf4aP49698 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hnf4aP49698 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hnf4aP49698 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hnf4aP49698 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hnf4aP49698 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hnf4aP49698 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hnf4aP49698 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.17□□□□□ -0.14
Hnf4aP49698 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hnf4aP49698 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hnf4aP49698 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hnf4aP49698 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Hnf4aP49698 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hnf4aP49698 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hnf4aP49698 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hnf4aP49698 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hnf4aP49698 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.17□□□□□ -0.14
Hnf4aP49698 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hnf4aP49698 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hnf4aP49698 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hnf4aP49698 Gm16198-201ENSMUST00000118766 670 ntBASIC14.17□□□□□ -0.14
Hnf4aP49698 Gm13464-201ENSMUST00000119418 935 ntBASIC14.17□□□□□ -0.14
Hnf4aP49698 Gm1401-201ENSMUST00000122048 772 ntBASIC14.17□□□□□ -0.14
Hnf4aP49698 Gm16026-204ENSMUST00000162652 683 ntBASIC14.17□□□□□ -0.14
Hnf4aP49698 Gm5177-201ENSMUST00000183092 997 ntBASIC14.17□□□□□ -0.14
Hnf4aP49698 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.17□□□□□ -0.14
Hnf4aP49698 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.17□□□□□ -0.14
Hnf4aP49698 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hnf4aP49698 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hnf4aP49698 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hnf4aP49698 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hnf4aP49698 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hnf4aP49698 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hnf4aP49698 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hnf4aP49698 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hnf4aP49698 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hnf4aP49698 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hnf4aP49698 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Hnf4aP49698 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hnf4aP49698 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hnf4aP49698 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hnf4aP49698 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hnf4aP49698 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hnf4aP49698 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hnf4aP49698 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hnf4aP49698 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hnf4aP49698 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Hnf4aP49698 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hnf4aP49698 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Hnf4aP49698 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hnf4aP49698 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hnf4aP49698 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.16□□□□□ -0.14
Hnf4aP49698 Gm5364-201ENSMUST00000216789 889 ntBASIC14.16□□□□□ -0.14
Hnf4aP49698 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.16□□□□□ -0.14
Hnf4aP49698 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Hnf4aP49698 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hnf4aP49698 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Hnf4aP49698 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hnf4aP49698 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Hnf4aP49698 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hnf4aP49698 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hnf4aP49698 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hnf4aP49698 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hnf4aP49698 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hnf4aP49698 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hnf4aP49698 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms