Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Tnfsf4P43488 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Tnfsf4P43488 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf4P43488 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf4P43488 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf4P43488 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf4P43488 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf4P43488 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf4P43488 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf4P43488 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf4P43488 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf4P43488 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Tnfsf4P43488 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf4P43488 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.14□□□□□ -0.15
Tnfsf4P43488 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Tnfsf4P43488 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.14□□□□□ -0.15
Tnfsf4P43488 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.14□□□□□ -0.15
Tnfsf4P43488 Gm7862-201ENSMUST00000121461 292 ntBASIC14.14□□□□□ -0.15
Tnfsf4P43488 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.14□□□□□ -0.15
Tnfsf4P43488 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf4P43488 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Tnfsf4P43488 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf4P43488 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.14□□□□□ -0.15
Tnfsf4P43488 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.14□□□□□ -0.15
Tnfsf4P43488 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Tnfsf4P43488 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf4P43488 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf4P43488 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf4P43488 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.14□□□□□ -0.15
Tnfsf4P43488 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf4P43488 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf4P43488 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Tnfsf4P43488 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf4P43488 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf4P43488 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf4P43488 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf4P43488 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfsf4P43488 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf4P43488 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf4P43488 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Tnfsf4P43488 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf4P43488 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf4P43488 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf4P43488 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf4P43488 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Tnfsf4P43488 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.13□□□□□ -0.15
Tnfsf4P43488 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.13□□□□□ -0.15
Tnfsf4P43488 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.13□□□□□ -0.15
Tnfsf4P43488 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf4P43488 Gm9726-201ENSMUST00000180321 678 ntBASIC14.13□□□□□ -0.15
Tnfsf4P43488 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf4P43488 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf4P43488 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf4P43488 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf4P43488 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf4P43488 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf4P43488 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf4P43488 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf4P43488 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf4P43488 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf4P43488 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf4P43488 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.13□□□□□ -0.15
Tnfsf4P43488 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf4P43488 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf4P43488 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfsf4P43488 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.13□□□□□ -0.15
Tnfsf4P43488 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Tnfsf4P43488 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf4P43488 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.12□□□□□ -0.15
Tnfsf4P43488 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Gm8749-201ENSMUST00000117737 331 ntBASIC14.12□□□□□ -0.15
Tnfsf4P43488 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tnfsf4P43488 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms