Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp9P41245 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp9P41245 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp9P41245 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp9P41245 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp9P41245 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp9P41245 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.31□□□□□ -0.44
Mmp9P41245 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp9P41245 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp9P41245 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp9P41245 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Mmp9P41245 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp9P41245 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp9P41245 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp9P41245 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Mmp9P41245 Gm19164-201ENSMUST00000210667 640 ntBASIC12.31□□□□□ -0.44
Mmp9P41245 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp9P41245 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Mmp9P41245 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp9P41245 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp9P41245 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp9P41245 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp9P41245 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp9P41245 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp9P41245 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp9P41245 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.31□□□□□ -0.44
Mmp9P41245 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp9P41245 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mmp9P41245 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Mmp9P41245 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Mmp9P41245 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.31□□□□□ -0.44
Mmp9P41245 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.3□□□□□ -0.44
Mmp9P41245 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Mmp9P41245 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Mmp9P41245 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
Mmp9P41245 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Mmp9P41245 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Mmp9P41245 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Mmp9P41245 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Mmp9P41245 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Mmp9P41245 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Mmp9P41245 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Mmp9P41245 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Mmp9P41245 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Mmp9P41245 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Mmp9P41245 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Mmp9P41245 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Mmp9P41245 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Mmp9P41245 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Mmp9P41245 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Mmp9P41245 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Mmp9P41245 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.3□□□□□ -0.44
Mmp9P41245 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.3□□□□□ -0.44
Mmp9P41245 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Mmp9P41245 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Mmp9P41245 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Mmp9P41245 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.3□□□□□ -0.44
Mmp9P41245 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Mmp9P41245 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.3□□□□□ -0.44
Mmp9P41245 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Mmp9P41245 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Mmp9P41245 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Mmp9P41245 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Mmp9P41245 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Mmp9P41245 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Mmp9P41245 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Mmp9P41245 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Mmp9P41245 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Mmp9P41245 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Mmp9P41245 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 Celf4-206ENSMUST00000224553 1729 ntBASIC12.29□□□□□ -0.44
Mmp9P41245 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Mmp9P41245 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 Gm18733-201ENSMUST00000173950 856 ntBASIC12.29□□□□□ -0.44
Mmp9P41245 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.29□□□□□ -0.44
Mmp9P41245 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 Gm43347-201ENSMUST00000200226 580 ntBASIC12.29□□□□□ -0.44
Mmp9P41245 Gm34391-201ENSMUST00000203706 907 ntBASIC12.29□□□□□ -0.44
Mmp9P41245 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp9P41245 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms