Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
VhlP40338 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
VhlP40338 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
VhlP40338 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
VhlP40338 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VhlP40338 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
VhlP40338 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.03□□□□□ -0.48
VhlP40338 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
VhlP40338 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VhlP40338 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VhlP40338 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
VhlP40338 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
VhlP40338 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
VhlP40338 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
VhlP40338 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
VhlP40338 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
VhlP40338 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
VhlP40338 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
VhlP40338 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
VhlP40338 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
VhlP40338 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
VhlP40338 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
VhlP40338 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
VhlP40338 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
VhlP40338 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
VhlP40338 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VhlP40338 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VhlP40338 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
VhlP40338 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
VhlP40338 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VhlP40338 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VhlP40338 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
VhlP40338 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.02□□□□□ -0.49
VhlP40338 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
VhlP40338 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.02□□□□□ -0.49
VhlP40338 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
VhlP40338 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VhlP40338 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
VhlP40338 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
VhlP40338 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.02□□□□□ -0.49
VhlP40338 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VhlP40338 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
VhlP40338 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
VhlP40338 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
VhlP40338 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
VhlP40338 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
VhlP40338 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VhlP40338 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VhlP40338 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VhlP40338 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.02□□□□□ -0.49
VhlP40338 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.02□□□□□ -0.49
VhlP40338 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VhlP40338 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.01□□□□□ -0.49
VhlP40338 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
VhlP40338 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VhlP40338 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VhlP40338 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VhlP40338 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.01□□□□□ -0.49
VhlP40338 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VhlP40338 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
VhlP40338 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VhlP40338 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VhlP40338 Gm27357-201ENSMUST00000183754 135 ntBASIC12.01□□□□□ -0.49
VhlP40338 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VhlP40338 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.01□□□□□ -0.49
VhlP40338 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VhlP40338 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VhlP40338 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VhlP40338 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
VhlP40338 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VhlP40338 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VhlP40338 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VhlP40338 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
VhlP40338 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VhlP40338 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VhlP40338 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VhlP40338 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VhlP40338 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
VhlP40338 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VhlP40338 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VhlP40338 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VhlP40338 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.01□□□□□ -0.49
VhlP40338 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VhlP40338 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VhlP40338 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VhlP40338 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.01□□□□□ -0.49
VhlP40338 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VhlP40338 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
VhlP40338 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VhlP40338 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
VhlP40338 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
VhlP40338 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VhlP40338 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.01□□□□□ -0.49
VhlP40338 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
VhlP40338 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VhlP40338 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
VhlP40338 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
VhlP40338 Gm4081-201ENSMUST00000195287 1838 ntBASIC12□□□□□ -0.49
VhlP40338 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
VhlP40338 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms