Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Fen1P39749 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Fen1P39749 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Fen1P39749 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Fen1P39749 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fen1P39749 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Fen1P39749 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fen1P39749 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fen1P39749 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Fen1P39749 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fen1P39749 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Fen1P39749 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fen1P39749 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fen1P39749 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fen1P39749 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.75□□□□□ -0.05
Fen1P39749 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fen1P39749 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Fen1P39749 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fen1P39749 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fen1P39749 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Fen1P39749 Gm8097-201ENSMUST00000117903 829 ntBASIC14.75□□□□□ -0.05
Fen1P39749 Gm15358-201ENSMUST00000119249 520 ntBASIC14.75□□□□□ -0.05
Fen1P39749 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Fen1P39749 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fen1P39749 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fen1P39749 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Fen1P39749 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fen1P39749 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fen1P39749 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fen1P39749 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fen1P39749 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fen1P39749 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fen1P39749 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Fen1P39749 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Fen1P39749 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Fen1P39749 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Fen1P39749 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fen1P39749 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fen1P39749 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Fen1P39749 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.74□□□□□ -0.05
Fen1P39749 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Fen1P39749 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Fen1P39749 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fen1P39749 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Fen1P39749 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fen1P39749 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.74□□□□□ -0.05
Fen1P39749 Gm24589-201ENSMUST00000116692 94 ntBASIC14.74□□□□□ -0.05
Fen1P39749 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.74□□□□□ -0.05
Fen1P39749 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fen1P39749 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Fen1P39749 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.74□□□□□ -0.05
Fen1P39749 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fen1P39749 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fen1P39749 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Fen1P39749 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Fen1P39749 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fen1P39749 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Fen1P39749 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.74□□□□□ -0.05
Fen1P39749 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fen1P39749 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fen1P39749 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Fen1P39749 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.74□□□□□ -0.05
Fen1P39749 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fen1P39749 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fen1P39749 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fen1P39749 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Fen1P39749 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Fen1P39749 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Fen1P39749 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fen1P39749 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Fen1P39749 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fen1P39749 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fen1P39749 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fen1P39749 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fen1P39749 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fen1P39749 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fen1P39749 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fen1P39749 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.73□□□□□ -0.05
Fen1P39749 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fen1P39749 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Fen1P39749 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fen1P39749 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Fen1P39749 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fen1P39749 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.73□□□□□ -0.05
Fen1P39749 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.73□□□□□ -0.05
Fen1P39749 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Fen1P39749 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fen1P39749 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fen1P39749 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fen1P39749 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fen1P39749 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fen1P39749 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fen1P39749 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Fen1P39749 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fen1P39749 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fen1P39749 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.73□□□□□ -0.05
Fen1P39749 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Fen1P39749 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fen1P39749 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Fen1P39749 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms