Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Rom1P32958 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.58□□□□□ -0.56
Rom1P32958 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rom1P32958 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rom1P32958 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rom1P32958 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Rom1P32958 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.58□□□□□ -0.56
Rom1P32958 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rom1P32958 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC11.58□□□□□ -0.56
Rom1P32958 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC11.58□□□□□ -0.56
Rom1P32958 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC11.58□□□□□ -0.56
Rom1P32958 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC11.58□□□□□ -0.56
Rom1P32958 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rom1P32958 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Rom1P32958 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Rom1P32958 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rom1P32958 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Rom1P32958 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rom1P32958 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rom1P32958 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rom1P32958 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rom1P32958 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rom1P32958 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Rom1P32958 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.58□□□□□ -0.56
Rom1P32958 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rom1P32958 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rom1P32958 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rom1P32958 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rom1P32958 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Rom1P32958 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rom1P32958 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rom1P32958 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Rom1P32958 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rom1P32958 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.57□□□□□ -0.56
Rom1P32958 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rom1P32958 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rom1P32958 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rom1P32958 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rom1P32958 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Rom1P32958 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rom1P32958 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rom1P32958 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rom1P32958 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rom1P32958 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rom1P32958 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rom1P32958 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rom1P32958 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rom1P32958 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Rom1P32958 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC11.57□□□□□ -0.56
Rom1P32958 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC11.57□□□□□ -0.56
Rom1P32958 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC11.57□□□□□ -0.56
Rom1P32958 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.57□□□□□ -0.56
Rom1P32958 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rom1P32958 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rom1P32958 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rom1P32958 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rom1P32958 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rom1P32958 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rom1P32958 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Rom1P32958 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rom1P32958 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rom1P32958 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Rom1P32958 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.57□□□□□ -0.56
Rom1P32958 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rom1P32958 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rom1P32958 Grk6-207ENSMUST00000225925 2769 ntBASIC11.56□□□□□ -0.56
Rom1P32958 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Rom1P32958 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Rom1P32958 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.56□□□□□ -0.56
Rom1P32958 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC11.56□□□□□ -0.56
Rom1P32958 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.56□□□□□ -0.56
Rom1P32958 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.56□□□□□ -0.56
Rom1P32958 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC11.56□□□□□ -0.56
Rom1P32958 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms