Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc6a11P31650 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc6a11P31650 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc6a11P31650 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.91□□□□□ -0.18
Slc6a11P31650 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Slc6a11P31650 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.91□□□□□ -0.18
Slc6a11P31650 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.91□□□□□ -0.18
Slc6a11P31650 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.91□□□□□ -0.18
Slc6a11P31650 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.91□□□□□ -0.18
Slc6a11P31650 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc6a11P31650 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Slc6a11P31650 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc6a11P31650 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.91□□□□□ -0.18
Slc6a11P31650 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.91□□□□□ -0.18
Slc6a11P31650 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc6a11P31650 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Slc6a11P31650 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc6a11P31650 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc6a11P31650 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc6a11P31650 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.9□□□□□ -0.18
Slc6a11P31650 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Slc6a11P31650 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc6a11P31650 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc6a11P31650 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc6a11P31650 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Slc6a11P31650 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Slc6a11P31650 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Slc6a11P31650 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Slc6a11P31650 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Slc6a11P31650 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Slc6a11P31650 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc6a11P31650 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Slc6a11P31650 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Slc6a11P31650 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.9□□□□□ -0.18
Slc6a11P31650 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc6a11P31650 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc6a11P31650 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc6a11P31650 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc6a11P31650 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Slc6a11P31650 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Slc6a11P31650 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.9□□□□□ -0.18
Slc6a11P31650 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc6a11P31650 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc6a11P31650 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc6a11P31650 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.9□□□□□ -0.18
Slc6a11P31650 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc6a11P31650 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc6a11P31650 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.9□□□□□ -0.18
Slc6a11P31650 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc6a11P31650 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc6a11P31650 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Slc6a11P31650 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Slc6a11P31650 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Slc6a11P31650 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Slc6a11P31650 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.89□□□□□ -0.19
Slc6a11P31650 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.89□□□□□ -0.19
Slc6a11P31650 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.89□□□□□ -0.19
Slc6a11P31650 Gm14701-201ENSMUST00000117156 348 ntBASIC13.89□□□□□ -0.19
Slc6a11P31650 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.89□□□□□ -0.19
Slc6a11P31650 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.89□□□□□ -0.19
Slc6a11P31650 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.89□□□□□ -0.19
Slc6a11P31650 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.89□□□□□ -0.19
Slc6a11P31650 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.89□□□□□ -0.19
Slc6a11P31650 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.89□□□□□ -0.19
Slc6a11P31650 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Slc6a11P31650 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a11P31650 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a11P31650 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a11P31650 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a11P31650 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms