Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfbP31240 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.55□□□□□ -0.08
PdgfbP31240 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.55□□□□□ -0.08
PdgfbP31240 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfbP31240 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfbP31240 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfbP31240 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfbP31240 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.55□□□□□ -0.08
PdgfbP31240 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfbP31240 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.55□□□□□ -0.08
PdgfbP31240 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.55□□□□□ -0.08
PdgfbP31240 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.55□□□□□ -0.08
PdgfbP31240 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
PdgfbP31240 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfbP31240 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfbP31240 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
PdgfbP31240 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.55□□□□□ -0.08
PdgfbP31240 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfbP31240 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfbP31240 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.55□□□□□ -0.08
PdgfbP31240 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PdgfbP31240 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfbP31240 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfbP31240 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfbP31240 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
PdgfbP31240 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfbP31240 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.54□□□□□ -0.08
PdgfbP31240 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfbP31240 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfbP31240 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfbP31240 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfbP31240 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfbP31240 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfbP31240 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
PdgfbP31240 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PdgfbP31240 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.54□□□□□ -0.08
PdgfbP31240 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfbP31240 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfbP31240 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfbP31240 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfbP31240 Gm27486-201ENSMUST00000184923 80 ntBASIC14.54□□□□□ -0.08
PdgfbP31240 Gm2495-201ENSMUST00000191160 466 ntBASIC14.54□□□□□ -0.08
PdgfbP31240 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfbP31240 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfbP31240 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.54□□□□□ -0.08
PdgfbP31240 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfbP31240 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.54□□□□□ -0.08
PdgfbP31240 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfbP31240 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfbP31240 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfbP31240 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PdgfbP31240 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfbP31240 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfbP31240 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdgfbP31240 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfbP31240 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfbP31240 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfbP31240 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfbP31240 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfbP31240 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
PdgfbP31240 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.53□□□□□ -0.08
PdgfbP31240 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PdgfbP31240 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.53□□□□□ -0.08
PdgfbP31240 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfbP31240 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfbP31240 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.53□□□□□ -0.08
PdgfbP31240 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfbP31240 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.53□□□□□ -0.08
PdgfbP31240 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PdgfbP31240 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PdgfbP31240 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfbP31240 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfbP31240 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.53□□□□□ -0.08
PdgfbP31240 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfbP31240 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfbP31240 Gm27731-201ENSMUST00000185192 107 ntBASIC14.53□□□□□ -0.08
PdgfbP31240 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.53□□□□□ -0.08
PdgfbP31240 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfbP31240 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.53□□□□□ -0.08
PdgfbP31240 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.53□□□□□ -0.08
PdgfbP31240 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.53□□□□□ -0.08
PdgfbP31240 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
PdgfbP31240 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.53□□□□□ -0.08
PdgfbP31240 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfbP31240 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfbP31240 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.53□□□□□ -0.08
PdgfbP31240 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfbP31240 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfbP31240 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PdgfbP31240 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdgfbP31240 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
PdgfbP31240 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PdgfbP31240 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PdgfbP31240 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
PdgfbP31240 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PdgfbP31240 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PdgfbP31240 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PdgfbP31240 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PdgfbP31240 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
PdgfbP31240 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms