Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6aP27664 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Pde6aP27664 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6aP27664 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6aP27664 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6aP27664 Gm22065-201ENSMUST00000103753 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm22066-201ENSMUST00000103761 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm24932-201ENSMUST00000103763 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm24115-201ENSMUST00000103799 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm22190-201ENSMUST00000103827 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm22191-201ENSMUST00000103831 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm24721-201ENSMUST00000103849 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm28018-201ENSMUST00000103869 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm26399-201ENSMUST00000103937 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6aP27664 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Pde6aP27664 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.96■□□□□ 0.31
Pde6aP27664 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6aP27664 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.96■□□□□ 0.31
Pde6aP27664 Gm25349-201ENSMUST00000177728 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm23616-201ENSMUST00000177797 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm25871-201ENSMUST00000177816 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm24752-201ENSMUST00000178240 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm24496-201ENSMUST00000178287 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm25649-201ENSMUST00000178476 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm25548-201ENSMUST00000178681 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm23147-201ENSMUST00000178841 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm26095-201ENSMUST00000179270 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm22171-201ENSMUST00000179283 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm23936-201ENSMUST00000179354 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm22619-201ENSMUST00000179516 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm25255-201ENSMUST00000179579 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm24755-201ENSMUST00000179691 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm26506-201ENSMUST00000179692 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm25086-201ENSMUST00000179931 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm23243-201ENSMUST00000180047 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm24659-201ENSMUST00000180212 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm24169-201ENSMUST00000180244 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm23689-201ENSMUST00000180354 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm27359-201ENSMUST00000184153 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm27785-201ENSMUST00000184268 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm27466-201ENSMUST00000184396 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Gm27703-201ENSMUST00000184836 110 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6aP27664 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.96■□□□□ 0.31
Pde6aP27664 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6aP27664 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6aP27664 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6aP27664 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6aP27664 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6aP27664 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6aP27664 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6aP27664 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pde6aP27664 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pde6aP27664 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pde6aP27664 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.96■□□□□ 0.3
Pde6aP27664 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6aP27664 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6aP27664 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6aP27664 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.95■□□□□ 0.3
Pde6aP27664 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6aP27664 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6aP27664 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6aP27664 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6aP27664 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6aP27664 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Pde6aP27664 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6aP27664 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6aP27664 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.95■□□□□ 0.3
Pde6aP27664 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6aP27664 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.95■□□□□ 0.3
Pde6aP27664 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Pde6aP27664 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6aP27664 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6aP27664 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6aP27664 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6aP27664 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6aP27664 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6aP27664 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6aP27664 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.95■□□□□ 0.3
Pde6aP27664 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.95■□□□□ 0.3
Pde6aP27664 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pde6aP27664 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pde6aP27664 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pde6aP27664 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pde6aP27664 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.94■□□□□ 0.3
Pde6aP27664 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pde6aP27664 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pde6aP27664 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pde6aP27664 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pde6aP27664 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Pde6aP27664 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Pde6aP27664 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pde6aP27664 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pde6aP27664 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.94■□□□□ 0.3
Pde6aP27664 Gm5312-201ENSMUST00000203728 547 ntBASIC16.94■□□□□ 0.3
Pde6aP27664 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.94■□□□□ 0.3
Pde6aP27664 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pde6aP27664 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.94■□□□□ 0.3
Pde6aP27664 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms