Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd48P18181 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd48P18181 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd48P18181 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cd48P18181 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd48P18181 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd48P18181 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Cd48P18181 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cd48P18181 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cd48P18181 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
Cd48P18181 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cd48P18181 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
Cd48P18181 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd48P18181 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cd48P18181 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd48P18181 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd48P18181 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cd48P18181 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cd48P18181 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd48P18181 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd48P18181 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd48P18181 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.14□□□□□ -0.31
Cd48P18181 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cd48P18181 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd48P18181 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd48P18181 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd48P18181 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd48P18181 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd48P18181 Gm15173-201ENSMUST00000122049 433 ntBASIC13.14□□□□□ -0.31
Cd48P18181 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cd48P18181 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cd48P18181 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Cd48P18181 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.14□□□□□ -0.31
Cd48P18181 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.14□□□□□ -0.31
Cd48P18181 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.14□□□□□ -0.31
Cd48P18181 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.14□□□□□ -0.31
Cd48P18181 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.14□□□□□ -0.31
Cd48P18181 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd48P18181 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cd48P18181 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd48P18181 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cd48P18181 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd48P18181 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd48P18181 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd48P18181 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cd48P18181 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cd48P18181 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd48P18181 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd48P18181 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.14□□□□□ -0.31
Cd48P18181 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd48P18181 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd48P18181 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Cd48P18181 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cd48P18181 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd48P18181 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd48P18181 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd48P18181 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd48P18181 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.13□□□□□ -0.31
Cd48P18181 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cd48P18181 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd48P18181 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd48P18181 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd48P18181 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd48P18181 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cd48P18181 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd48P18181 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd48P18181 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cd48P18181 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cd48P18181 Gm7862-201ENSMUST00000121461 292 ntBASIC13.13□□□□□ -0.31
Cd48P18181 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.13□□□□□ -0.31
Cd48P18181 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.13□□□□□ -0.31
Cd48P18181 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.13□□□□□ -0.31
Cd48P18181 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.13□□□□□ -0.31
Cd48P18181 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cd48P18181 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
Cd48P18181 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd48P18181 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd48P18181 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd48P18181 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd48P18181 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.13□□□□□ -0.31
Cd48P18181 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd48P18181 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd48P18181 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cd48P18181 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd48P18181 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cd48P18181 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.13□□□□□ -0.31
Cd48P18181 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd48P18181 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cd48P18181 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd48P18181 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cd48P18181 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.12□□□□□ -0.31
Cd48P18181 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cd48P18181 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cd48P18181 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.12□□□□□ -0.31
Cd48P18181 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cd48P18181 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.12□□□□□ -0.31
Cd48P18181 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cd48P18181 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cd48P18181 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cd48P18181 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms