Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl1P10146 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl1P10146 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.36□□□□□ -0.59
Ccl1P10146 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC11.36□□□□□ -0.59
Ccl1P10146 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.36□□□□□ -0.59
Ccl1P10146 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.36□□□□□ -0.59
Ccl1P10146 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC11.36□□□□□ -0.59
Ccl1P10146 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.36□□□□□ -0.59
Ccl1P10146 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl1P10146 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.36□□□□□ -0.59
Ccl1P10146 Gm45293-201ENSMUST00000209754 1812 ntBASIC11.36□□□□□ -0.59
Ccl1P10146 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Ccl1P10146 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.36□□□□□ -0.59
Ccl1P10146 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl1P10146 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.36□□□□□ -0.59
Ccl1P10146 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl1P10146 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl1P10146 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl1P10146 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.36□□□□□ -0.59
Ccl1P10146 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl1P10146 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl1P10146 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl1P10146 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.36□□□□□ -0.59
Ccl1P10146 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl1P10146 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl1P10146 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Ccl1P10146 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.36□□□□□ -0.59
Ccl1P10146 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl1P10146 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl1P10146 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Ccl1P10146 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl1P10146 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl1P10146 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl1P10146 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl1P10146 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl1P10146 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl1P10146 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl1P10146 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC11.35□□□□□ -0.59
Ccl1P10146 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl1P10146 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl1P10146 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl1P10146 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl1P10146 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl1P10146 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl1P10146 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.35□□□□□ -0.59
Ccl1P10146 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.35□□□□□ -0.59
Ccl1P10146 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl1P10146 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Ccl1P10146 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.35□□□□□ -0.59
Ccl1P10146 Gm22697-201ENSMUST00000175194 63 ntBASIC11.35□□□□□ -0.59
Ccl1P10146 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl1P10146 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl1P10146 AC134329.2-201ENSMUST00000217897 428 ntBASIC11.35□□□□□ -0.59
Ccl1P10146 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl1P10146 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl1P10146 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl1P10146 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Ccl1P10146 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl1P10146 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl1P10146 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.35□□□□□ -0.59
Ccl1P10146 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl1P10146 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Ccl1P10146 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.35□□□□□ -0.59
Ccl1P10146 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl1P10146 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.35□□□□□ -0.59
Ccl1P10146 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Ccl1P10146 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC11.35□□□□□ -0.59
Ccl1P10146 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl1P10146 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl1P10146 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl1P10146 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl1P10146 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.34□□□□□ -0.59
Ccl1P10146 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl1P10146 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl1P10146 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl1P10146 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.34□□□□□ -0.59
Ccl1P10146 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl1P10146 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Ccl1P10146 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl1P10146 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.34□□□□□ -0.59
Ccl1P10146 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl1P10146 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Ccl1P10146 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl1P10146 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl1P10146 Gm6623-201ENSMUST00000173570 544 ntBASIC11.34□□□□□ -0.59
Ccl1P10146 Gm20472-201ENSMUST00000174403 1240 ntBASIC11.34□□□□□ -0.59
Ccl1P10146 Gm9172-201ENSMUST00000212092 954 ntBASIC11.34□□□□□ -0.59
Ccl1P10146 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.34□□□□□ -0.59
Ccl1P10146 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl1P10146 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl1P10146 Gm10812-201ENSMUST00000099864 546 ntBASIC11.34□□□□□ -0.59
Ccl1P10146 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl1P10146 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl1P10146 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Ccl1P10146 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl1P10146 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl1P10146 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.34□□□□□ -0.59
Ccl1P10146 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl1P10146 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl1P10146 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms