Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NefmP08553 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NefmP08553 Gm18856-201ENSMUST00000178096 1374 ntBASIC21.62■■□□□ 1.05
NefmP08553 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NefmP08553 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC21.62■■□□□ 1.05
NefmP08553 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NefmP08553 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NefmP08553 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
NefmP08553 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
NefmP08553 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
NefmP08553 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NefmP08553 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NefmP08553 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NefmP08553 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NefmP08553 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC21.62■■□□□ 1.05
NefmP08553 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
NefmP08553 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
NefmP08553 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NefmP08553 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NefmP08553 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NefmP08553 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NefmP08553 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NefmP08553 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC21.62■■□□□ 1.05
NefmP08553 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NefmP08553 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NefmP08553 Ssr1-204ENSMUST00000225319 1610 ntBASIC21.62■■□□□ 1.05
NefmP08553 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC21.62■■□□□ 1.05
NefmP08553 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NefmP08553 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NefmP08553 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NefmP08553 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NefmP08553 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
NefmP08553 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NefmP08553 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NefmP08553 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
NefmP08553 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NefmP08553 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NefmP08553 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
NefmP08553 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC21.61■■□□□ 1.05
NefmP08553 Gm7230-201ENSMUST00000173026 815 ntBASIC21.61■■□□□ 1.05
NefmP08553 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NefmP08553 Spr-ps1-201ENSMUST00000089584 605 ntBASIC21.61■■□□□ 1.05
NefmP08553 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NefmP08553 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NefmP08553 AC131743.5-201ENSMUST00000220775 1618 ntBASIC21.61■■□□□ 1.05
NefmP08553 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
NefmP08553 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC21.61■■□□□ 1.05
NefmP08553 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NefmP08553 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NefmP08553 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NefmP08553 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NefmP08553 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NefmP08553 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NefmP08553 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NefmP08553 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NefmP08553 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NefmP08553 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NefmP08553 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC21.6■■□□□ 1.05
NefmP08553 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NefmP08553 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC21.6■■□□□ 1.05
NefmP08553 Gm4899-201ENSMUST00000178708 719 ntBASIC21.6■■□□□ 1.05
NefmP08553 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC21.6■■□□□ 1.05
NefmP08553 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
NefmP08553 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
NefmP08553 Birc2-201ENSMUST00000054878 378 ntBASIC21.6■■□□□ 1.05
NefmP08553 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NefmP08553 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
NefmP08553 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NefmP08553 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC21.6■■□□□ 1.05
NefmP08553 AC166491.1-201ENSMUST00000227053 2308 ntBASIC21.6■■□□□ 1.05
NefmP08553 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NefmP08553 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
NefmP08553 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
NefmP08553 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NefmP08553 Gm13294-201ENSMUST00000121757 1330 ntBASIC21.59■■□□□ 1.05
NefmP08553 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NefmP08553 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NefmP08553 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
NefmP08553 Gm14042-201ENSMUST00000120139 833 ntBASIC21.59■■□□□ 1.05
NefmP08553 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NefmP08553 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC21.59■■□□□ 1.05
NefmP08553 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NefmP08553 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NefmP08553 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC21.59■■□□□ 1.05
NefmP08553 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC21.59■■□□□ 1.05
NefmP08553 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NefmP08553 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NefmP08553 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NefmP08553 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NefmP08553 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
NefmP08553 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
NefmP08553 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC21.59■■□□□ 1.05
NefmP08553 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC21.59■■□□□ 1.05
NefmP08553 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NefmP08553 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NefmP08553 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NefmP08553 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NefmP08553 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NefmP08553 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC21.58■■□□□ 1.05
NefmP08553 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms