Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Gm5566-201ENSMUST00000116118 459 ntBASIC14.39□□□□□ -0.11
Hoxa4P06798 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa4P06798 Gm15920-201ENSMUST00000118998 402 ntBASIC14.39□□□□□ -0.11
Hoxa4P06798 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa4P06798 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Hoxa4P06798 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Hoxa4P06798 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa4P06798 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa4P06798 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Hoxa4P06798 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa4P06798 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Hoxa4P06798 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.39□□□□□ -0.11
Hoxa4P06798 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa4P06798 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa4P06798 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Hoxa4P06798 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa4P06798 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Hoxa4P06798 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa4P06798 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa4P06798 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa4P06798 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa4P06798 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa4P06798 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa4P06798 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa4P06798 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa4P06798 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa4P06798 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Hoxa4P06798 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa4P06798 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa4P06798 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa4P06798 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa4P06798 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa4P06798 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.38□□□□□ -0.11
Hoxa4P06798 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa4P06798 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa4P06798 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa4P06798 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa4P06798 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa4P06798 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa4P06798 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Hoxa4P06798 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa4P06798 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa4P06798 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.38□□□□□ -0.11
Hoxa4P06798 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.38□□□□□ -0.11
Hoxa4P06798 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.38□□□□□ -0.11
Hoxa4P06798 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.38□□□□□ -0.11
Hoxa4P06798 Gm23547-201ENSMUST00000158210 271 ntBASIC14.38□□□□□ -0.11
Hoxa4P06798 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa4P06798 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.38□□□□□ -0.11
Hoxa4P06798 Gm5779-201ENSMUST00000218467 910 ntBASIC14.38□□□□□ -0.11
Hoxa4P06798 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa4P06798 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Hoxa4P06798 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa4P06798 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Hoxa4P06798 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa4P06798 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa4P06798 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa4P06798 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Hoxa4P06798 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.38□□□□□ -0.11
Hoxa4P06798 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.38□□□□□ -0.11
Hoxa4P06798 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa4P06798 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa4P06798 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxa4P06798 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hoxa4P06798 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa4P06798 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa4P06798 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa4P06798 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.37□□□□□ -0.11
Hoxa4P06798 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa4P06798 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa4P06798 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.37□□□□□ -0.11
Hoxa4P06798 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hoxa4P06798 Gm25948-201ENSMUST00000175334 112 ntBASIC14.37□□□□□ -0.11
Hoxa4P06798 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa4P06798 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.37□□□□□ -0.11
Hoxa4P06798 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa4P06798 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa4P06798 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa4P06798 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa4P06798 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa4P06798 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa4P06798 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.37□□□□□ -0.11
Hoxa4P06798 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa4P06798 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa4P06798 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa4P06798 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa4P06798 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa4P06798 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa4P06798 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa4P06798 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa4P06798 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa4P06798 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.36□□□□□ -0.11
Hoxa4P06798 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa4P06798 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Hoxa4P06798 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa4P06798 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.36□□□□□ -0.11
Hoxa4P06798 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa4P06798 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa4P06798 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa4P06798 Gm6415-201ENSMUST00000118488 348 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms