Protein–RNA interactions for Protein: P01739

T-cell receptor alpha chain V region 2B4, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01739 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
P01739 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P01739 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
P01739 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01739 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01739 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
P01739 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01739 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01739 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
P01739 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01739 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01739 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01739 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01739 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01739 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01739 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01739 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.05□□□□□ -0.64
P01739 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01739 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.05□□□□□ -0.64
P01739 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
P01739 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01739 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
P01739 Gm12008-201ENSMUST00000117791 755 ntBASIC11.05□□□□□ -0.64
P01739 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.05□□□□□ -0.64
P01739 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P01739 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01739 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01739 Mir5126-201ENSMUST00000175513 77 ntBASIC11.05□□□□□ -0.64
P01739 Gm27628-201ENSMUST00000184911 107 ntBASIC11.05□□□□□ -0.64
P01739 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01739 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01739 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01739 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01739 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01739 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
P01739 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01739 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
P01739 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P01739 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01739 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01739 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P01739 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01739 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01739 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01739 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01739 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01739 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
P01739 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01739 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P01739 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01739 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P01739 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01739 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01739 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01739 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P01739 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.04□□□□□ -0.64
P01739 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P01739 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
P01739 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01739 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
P01739 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01739 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01739 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01739 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC11.04□□□□□ -0.64
P01739 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P01739 Gm23547-201ENSMUST00000158210 271 ntBASIC11.04□□□□□ -0.64
P01739 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
P01739 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.04□□□□□ -0.64
P01739 Gm27300-201ENSMUST00000184085 97 ntBASIC11.04□□□□□ -0.64
P01739 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC11.04□□□□□ -0.64
P01739 Gm27335-201ENSMUST00000184758 97 ntBASIC11.04□□□□□ -0.64
P01739 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.04□□□□□ -0.64
P01739 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
P01739 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.04□□□□□ -0.64
P01739 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P01739 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01739 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
P01739 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01739 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
P01739 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01739 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.04□□□□□ -0.64
P01739 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01739 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
P01739 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.04□□□□□ -0.64
P01739 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01739 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01739 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01739 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
P01739 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01739 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01739 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
P01739 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
P01739 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P01739 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01739 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
P01739 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.03□□□□□ -0.64
P01739 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01739 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P01739 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01739 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms