Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CopeO89079 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CopeO89079 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CopeO89079 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CopeO89079 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CopeO89079 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CopeO89079 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CopeO89079 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CopeO89079 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CopeO89079 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CopeO89079 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CopeO89079 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CopeO89079 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CopeO89079 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CopeO89079 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CopeO89079 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.11■□□□□ 0.01
CopeO89079 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CopeO89079 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CopeO89079 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CopeO89079 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CopeO89079 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.11■□□□□ 0.01
CopeO89079 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.11■□□□□ 0.01
CopeO89079 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CopeO89079 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CopeO89079 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CopeO89079 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CopeO89079 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CopeO89079 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.11■□□□□ 0.01
CopeO89079 Gm6089-201ENSMUST00000197666 938 ntBASIC15.11■□□□□ 0.01
CopeO89079 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CopeO89079 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.11■□□□□ 0.01
CopeO89079 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CopeO89079 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CopeO89079 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CopeO89079 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CopeO89079 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CopeO89079 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CopeO89079 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CopeO89079 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CopeO89079 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CopeO89079 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.11■□□□□ 0.01
CopeO89079 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CopeO89079 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CopeO89079 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CopeO89079 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CopeO89079 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CopeO89079 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CopeO89079 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
CopeO89079 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CopeO89079 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.1■□□□□ 0.01
CopeO89079 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CopeO89079 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CopeO89079 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.1■□□□□ 0.01
CopeO89079 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.1■□□□□ 0.01
CopeO89079 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CopeO89079 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CopeO89079 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CopeO89079 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CopeO89079 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CopeO89079 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.1■□□□□ 0.01
CopeO89079 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CopeO89079 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CopeO89079 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CopeO89079 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CopeO89079 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CopeO89079 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CopeO89079 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CopeO89079 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CopeO89079 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CopeO89079 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CopeO89079 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CopeO89079 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CopeO89079 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CopeO89079 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CopeO89079 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CopeO89079 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CopeO89079 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CopeO89079 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CopeO89079 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CopeO89079 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CopeO89079 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.09■□□□□ 0.01
CopeO89079 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CopeO89079 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CopeO89079 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.09■□□□□ 0.01
CopeO89079 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CopeO89079 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CopeO89079 Gm5682-201ENSMUST00000173402 505 ntBASIC15.09■□□□□ 0.01
CopeO89079 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CopeO89079 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CopeO89079 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CopeO89079 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.09■□□□□ 0.01
CopeO89079 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CopeO89079 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.09■□□□□ 0.01
CopeO89079 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CopeO89079 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CopeO89079 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CopeO89079 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CopeO89079 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CopeO89079 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CopeO89079 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms