Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Best4-ps-201ENSMUST00000129783 1380 ntBASIC10.39□□□□□ -0.75
Sh2d1aO88890 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Sh2d1aO88890 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sh2d1aO88890 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sh2d1aO88890 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sh2d1aO88890 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Sh2d1aO88890 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sh2d1aO88890 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sh2d1aO88890 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sh2d1aO88890 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sh2d1aO88890 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sh2d1aO88890 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sh2d1aO88890 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sh2d1aO88890 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sh2d1aO88890 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC10.38□□□□□ -0.75
Sh2d1aO88890 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Sh2d1aO88890 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sh2d1aO88890 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sh2d1aO88890 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sh2d1aO88890 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sh2d1aO88890 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sh2d1aO88890 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC10.38□□□□□ -0.75
Sh2d1aO88890 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sh2d1aO88890 AC164629.2-201ENSMUST00000217916 270 ntBASIC10.38□□□□□ -0.75
Sh2d1aO88890 Gm18246-201ENSMUST00000221023 728 ntBASIC10.38□□□□□ -0.75
Sh2d1aO88890 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC10.38□□□□□ -0.75
Sh2d1aO88890 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sh2d1aO88890 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sh2d1aO88890 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sh2d1aO88890 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC10.38□□□□□ -0.75
Sh2d1aO88890 Carlr-201ENSMUST00000181515 2574 ntBASIC10.38□□□□□ -0.75
Sh2d1aO88890 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sh2d1aO88890 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sh2d1aO88890 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sh2d1aO88890 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sh2d1aO88890 Gm29361-201ENSMUST00000183323 2000 ntBASIC10.38□□□□□ -0.75
Sh2d1aO88890 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sh2d1aO88890 AC130669.1-201ENSMUST00000228537 1672 ntBASIC10.38□□□□□ -0.75
Sh2d1aO88890 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sh2d1aO88890 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Gm13036-201ENSMUST00000117799 748 ntBASIC10.37□□□□□ -0.75
Sh2d1aO88890 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC10.37□□□□□ -0.75
Sh2d1aO88890 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC10.37□□□□□ -0.75
Sh2d1aO88890 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC10.37□□□□□ -0.75
Sh2d1aO88890 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Ksr1-207ENSMUST00000226282 5260 ntBASIC10.37□□□□□ -0.75
Sh2d1aO88890 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Sh2d1aO88890 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sh2d1aO88890 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sh2d1aO88890 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms