Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Gm7506-201ENSMUST00000207758 815 ntBASIC14.03□□□□□ -0.16
Hcn3O88705 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.03□□□□□ -0.16
Hcn3O88705 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.03□□□□□ -0.16
Hcn3O88705 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.03□□□□□ -0.16
Hcn3O88705 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 Birc2-201ENSMUST00000054878 378 ntBASIC14.03□□□□□ -0.16
Hcn3O88705 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.03□□□□□ -0.16
Hcn3O88705 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Hcn3O88705 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.03□□□□□ -0.16
Hcn3O88705 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
Hcn3O88705 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hcn3O88705 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Hcn3O88705 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Hcn3O88705 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Hcn3O88705 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hcn3O88705 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hcn3O88705 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hcn3O88705 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hcn3O88705 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hcn3O88705 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hcn3O88705 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hcn3O88705 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hcn3O88705 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hcn3O88705 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Hcn3O88705 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hcn3O88705 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Hcn3O88705 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hcn3O88705 Gm24589-201ENSMUST00000116692 94 ntBASIC14.02□□□□□ -0.17
Hcn3O88705 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.02□□□□□ -0.17
Hcn3O88705 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hcn3O88705 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hcn3O88705 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Hcn3O88705 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hcn3O88705 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hcn3O88705 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hcn3O88705 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hcn3O88705 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hcn3O88705 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hcn3O88705 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Hcn3O88705 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn3O88705 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn3O88705 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn3O88705 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn3O88705 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn3O88705 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn3O88705 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hcn3O88705 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn3O88705 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn3O88705 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.01□□□□□ -0.17
Hcn3O88705 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn3O88705 Gm8318-201ENSMUST00000182954 872 ntBASIC14.01□□□□□ -0.17
Hcn3O88705 Gm43347-201ENSMUST00000200226 580 ntBASIC14.01□□□□□ -0.17
Hcn3O88705 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.01□□□□□ -0.17
Hcn3O88705 Gm18622-201ENSMUST00000219361 595 ntBASIC14.01□□□□□ -0.17
Hcn3O88705 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn3O88705 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn3O88705 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.01□□□□□ -0.17
Hcn3O88705 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn3O88705 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.01□□□□□ -0.17
Hcn3O88705 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn3O88705 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn3O88705 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn3O88705 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn3O88705 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.01□□□□□ -0.17
Hcn3O88705 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn3O88705 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn3O88705 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.01□□□□□ -0.17
Hcn3O88705 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn3O88705 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn3O88705 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn3O88705 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn3O88705 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn3O88705 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn3O88705 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn3O88705 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn3O88705 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn3O88705 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn3O88705 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn3O88705 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn3O88705 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn3O88705 AC160338.1-201ENSMUST00000214232 705 ntBASIC14□□□□□ -0.17
Hcn3O88705 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn3O88705 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn3O88705 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 154.8 ms