Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Gm20949-201ENSMUST00000206478 952 ntBASIC13.28□□□□□ -0.28
Lmx1bO88609 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.28□□□□□ -0.28
Lmx1bO88609 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lmx1bO88609 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
Lmx1bO88609 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lmx1bO88609 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lmx1bO88609 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Lmx1bO88609 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lmx1bO88609 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lmx1bO88609 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.28□□□□□ -0.28
Lmx1bO88609 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.28□□□□□ -0.28
Lmx1bO88609 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lmx1bO88609 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lmx1bO88609 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Lmx1bO88609 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lmx1bO88609 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lmx1bO88609 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lmx1bO88609 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lmx1bO88609 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lmx1bO88609 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Lmx1bO88609 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lmx1bO88609 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lmx1bO88609 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.27□□□□□ -0.28
Lmx1bO88609 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lmx1bO88609 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.28
Lmx1bO88609 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Lmx1bO88609 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lmx1bO88609 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Lmx1bO88609 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Lmx1bO88609 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lmx1bO88609 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lmx1bO88609 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lmx1bO88609 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.27□□□□□ -0.29
Lmx1bO88609 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.27□□□□□ -0.29
Lmx1bO88609 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.27□□□□□ -0.29
Lmx1bO88609 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.27□□□□□ -0.29
Lmx1bO88609 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lmx1bO88609 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lmx1bO88609 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lmx1bO88609 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lmx1bO88609 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lmx1bO88609 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.27□□□□□ -0.29
Lmx1bO88609 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lmx1bO88609 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.27□□□□□ -0.29
Lmx1bO88609 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lmx1bO88609 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lmx1bO88609 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lmx1bO88609 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lmx1bO88609 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lmx1bO88609 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lmx1bO88609 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lmx1bO88609 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Lmx1bO88609 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lmx1bO88609 Gm25287-201ENSMUST00000103846 110 ntBASIC13.26□□□□□ -0.29
Lmx1bO88609 Gm22918-201ENSMUST00000103855 110 ntBASIC13.26□□□□□ -0.29
Lmx1bO88609 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lmx1bO88609 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lmx1bO88609 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.26□□□□□ -0.29
Lmx1bO88609 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lmx1bO88609 Gm2810-201ENSMUST00000118681 990 ntBASIC13.26□□□□□ -0.29
Lmx1bO88609 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lmx1bO88609 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.26□□□□□ -0.29
Lmx1bO88609 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.26□□□□□ -0.29
Lmx1bO88609 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Lmx1bO88609 Gm43767-201ENSMUST00000198933 381 ntBASIC13.26□□□□□ -0.29
Lmx1bO88609 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.26□□□□□ -0.29
Lmx1bO88609 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lmx1bO88609 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lmx1bO88609 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lmx1bO88609 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lmx1bO88609 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lmx1bO88609 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lmx1bO88609 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lmx1bO88609 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lmx1bO88609 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Lmx1bO88609 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lmx1bO88609 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lmx1bO88609 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lmx1bO88609 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lmx1bO88609 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lmx1bO88609 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lmx1bO88609 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lmx1bO88609 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Lmx1bO88609 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lmx1bO88609 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lmx1bO88609 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lmx1bO88609 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lmx1bO88609 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.25□□□□□ -0.29
Lmx1bO88609 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.25□□□□□ -0.29
Lmx1bO88609 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lmx1bO88609 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lmx1bO88609 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lmx1bO88609 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lmx1bO88609 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lmx1bO88609 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lmx1bO88609 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Lmx1bO88609 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lmx1bO88609 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.25□□□□□ -0.29
Lmx1bO88609 Gm27920-201ENSMUST00000183953 96 ntBASIC13.25□□□□□ -0.29
Lmx1bO88609 Gm27430-201ENSMUST00000184585 107 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms