Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops3O88543 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops3O88543 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.14□□□□□ -0.31
Cops3O88543 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops3O88543 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops3O88543 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.14□□□□□ -0.31
Cops3O88543 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.14□□□□□ -0.31
Cops3O88543 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.14□□□□□ -0.31
Cops3O88543 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.14□□□□□ -0.31
Cops3O88543 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.14□□□□□ -0.31
Cops3O88543 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops3O88543 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops3O88543 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops3O88543 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops3O88543 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cops3O88543 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cops3O88543 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops3O88543 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops3O88543 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops3O88543 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.14□□□□□ -0.31
Cops3O88543 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops3O88543 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops3O88543 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cops3O88543 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cops3O88543 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.13□□□□□ -0.31
Cops3O88543 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops3O88543 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops3O88543 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cops3O88543 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops3O88543 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops3O88543 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops3O88543 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cops3O88543 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops3O88543 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cops3O88543 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.13□□□□□ -0.31
Cops3O88543 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Cops3O88543 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops3O88543 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cops3O88543 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops3O88543 Gm25990-201ENSMUST00000102440 86 ntBASIC13.13□□□□□ -0.31
Cops3O88543 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Cops3O88543 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops3O88543 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.13□□□□□ -0.31
Cops3O88543 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops3O88543 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.13□□□□□ -0.31
Cops3O88543 Ank2-226ENSMUST00000189368 339 ntBASIC13.13□□□□□ -0.31
Cops3O88543 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cops3O88543 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.13□□□□□ -0.31
Cops3O88543 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops3O88543 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops3O88543 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.13□□□□□ -0.31
Cops3O88543 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops3O88543 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Cops3O88543 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops3O88543 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops3O88543 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops3O88543 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
Cops3O88543 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cops3O88543 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops3O88543 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cops3O88543 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops3O88543 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops3O88543 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cops3O88543 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Cops3O88543 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Cops3O88543 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.12□□□□□ -0.31
Cops3O88543 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.12□□□□□ -0.31
Cops3O88543 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.12□□□□□ -0.31
Cops3O88543 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.12□□□□□ -0.31
Cops3O88543 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.12□□□□□ -0.31
Cops3O88543 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Cops3O88543 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.12□□□□□ -0.31
Cops3O88543 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Cops3O88543 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms