Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
IkbkbO88351 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.19■□□□□ 0.18
IkbkbO88351 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.19■□□□□ 0.18
IkbkbO88351 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.19■□□□□ 0.18
IkbkbO88351 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IkbkbO88351 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.19■□□□□ 0.18
IkbkbO88351 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IkbkbO88351 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
IkbkbO88351 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IkbkbO88351 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.19■□□□□ 0.18
IkbkbO88351 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IkbkbO88351 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IkbkbO88351 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
IkbkbO88351 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IkbkbO88351 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
IkbkbO88351 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
IkbkbO88351 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
IkbkbO88351 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IkbkbO88351 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IkbkbO88351 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.19■□□□□ 0.18
IkbkbO88351 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IkbkbO88351 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IkbkbO88351 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
IkbkbO88351 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.19■□□□□ 0.18
IkbkbO88351 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IkbkbO88351 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IkbkbO88351 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
IkbkbO88351 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IkbkbO88351 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
IkbkbO88351 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
IkbkbO88351 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IkbkbO88351 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IkbkbO88351 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.18■□□□□ 0.18
IkbkbO88351 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
IkbkbO88351 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.18■□□□□ 0.18
IkbkbO88351 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
IkbkbO88351 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IkbkbO88351 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IkbkbO88351 Gm13365-201ENSMUST00000121188 973 ntBASIC16.18■□□□□ 0.18
IkbkbO88351 Gm11745-201ENSMUST00000121669 448 ntBASIC16.18■□□□□ 0.18
IkbkbO88351 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.18■□□□□ 0.18
IkbkbO88351 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.18■□□□□ 0.18
IkbkbO88351 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
IkbkbO88351 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IkbkbO88351 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
IkbkbO88351 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
IkbkbO88351 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IkbkbO88351 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IkbkbO88351 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IkbkbO88351 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IkbkbO88351 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IkbkbO88351 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IkbkbO88351 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IkbkbO88351 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
IkbkbO88351 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IkbkbO88351 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IkbkbO88351 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
IkbkbO88351 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IkbkbO88351 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IkbkbO88351 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IkbkbO88351 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IkbkbO88351 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IkbkbO88351 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
IkbkbO88351 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IkbkbO88351 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IkbkbO88351 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
IkbkbO88351 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
IkbkbO88351 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.17■□□□□ 0.18
IkbkbO88351 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
IkbkbO88351 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
IkbkbO88351 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
IkbkbO88351 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.17■□□□□ 0.18
IkbkbO88351 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.17■□□□□ 0.18
IkbkbO88351 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
IkbkbO88351 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
IkbkbO88351 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
IkbkbO88351 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IkbkbO88351 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IkbkbO88351 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IkbkbO88351 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
IkbkbO88351 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IkbkbO88351 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
IkbkbO88351 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
IkbkbO88351 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IkbkbO88351 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IkbkbO88351 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IkbkbO88351 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IkbkbO88351 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.16■□□□□ 0.18
IkbkbO88351 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
IkbkbO88351 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IkbkbO88351 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
IkbkbO88351 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IkbkbO88351 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IkbkbO88351 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IkbkbO88351 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
IkbkbO88351 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
IkbkbO88351 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IkbkbO88351 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
IkbkbO88351 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IkbkbO88351 Gm25925-201ENSMUST00000158314 306 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms