Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc4a4O88343 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Slc4a4O88343 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc4a4O88343 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Slc4a4O88343 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Slc4a4O88343 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Slc4a4O88343 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slc4a4O88343 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc4a4O88343 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slc4a4O88343 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc4a4O88343 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slc4a4O88343 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc4a4O88343 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc4a4O88343 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.25■□□□□ 0.35
Slc4a4O88343 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.25■□□□□ 0.35
Slc4a4O88343 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slc4a4O88343 Gm27618-201ENSMUST00000183671 60 ntBASIC17.25■□□□□ 0.35
Slc4a4O88343 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.25■□□□□ 0.35
Slc4a4O88343 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc4a4O88343 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc4a4O88343 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc4a4O88343 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc4a4O88343 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc4a4O88343 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.24■□□□□ 0.35
Slc4a4O88343 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc4a4O88343 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc4a4O88343 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc4a4O88343 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc4a4O88343 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc4a4O88343 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc4a4O88343 Gm38294-201ENSMUST00000192831 381 ntBASIC17.24■□□□□ 0.35
Slc4a4O88343 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.24■□□□□ 0.35
Slc4a4O88343 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc4a4O88343 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc4a4O88343 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc4a4O88343 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc4a4O88343 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc4a4O88343 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc4a4O88343 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc4a4O88343 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Slc4a4O88343 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc4a4O88343 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.24■□□□□ 0.35
Slc4a4O88343 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc4a4O88343 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc4a4O88343 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc4a4O88343 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc4a4O88343 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc4a4O88343 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc4a4O88343 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc4a4O88343 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc4a4O88343 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc4a4O88343 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc4a4O88343 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc4a4O88343 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.23■□□□□ 0.35
Slc4a4O88343 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc4a4O88343 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc4a4O88343 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.23■□□□□ 0.35
Slc4a4O88343 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.23■□□□□ 0.35
Slc4a4O88343 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc4a4O88343 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.23■□□□□ 0.35
Slc4a4O88343 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.23■□□□□ 0.35
Slc4a4O88343 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Slc4a4O88343 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc4a4O88343 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc4a4O88343 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Slc4a4O88343 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc4a4O88343 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.23■□□□□ 0.35
Slc4a4O88343 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.23■□□□□ 0.35
Slc4a4O88343 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc4a4O88343 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc4a4O88343 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.23■□□□□ 0.35
Slc4a4O88343 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc4a4O88343 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc4a4O88343 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Slc4a4O88343 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc4a4O88343 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Slc4a4O88343 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc4a4O88343 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Slc4a4O88343 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc4a4O88343 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc4a4O88343 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc4a4O88343 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc4a4O88343 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc4a4O88343 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc4a4O88343 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc4a4O88343 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.22■□□□□ 0.35
Slc4a4O88343 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc4a4O88343 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc4a4O88343 Gm28630-201ENSMUST00000187806 498 ntBASIC17.22■□□□□ 0.35
Slc4a4O88343 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc4a4O88343 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc4a4O88343 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc4a4O88343 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.22■□□□□ 0.35
Slc4a4O88343 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc4a4O88343 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.22■□□□□ 0.35
Slc4a4O88343 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc4a4O88343 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Slc4a4O88343 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Slc4a4O88343 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Slc4a4O88343 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms