Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10226O88253 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10226O88253 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10226O88253 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10226O88253 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.27□□□□□ -0.61
Gm10226O88253 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Gm10226O88253 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10226O88253 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10226O88253 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Gm10226O88253 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10226O88253 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10226O88253 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10226O88253 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10226O88253 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10226O88253 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10226O88253 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10226O88253 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10226O88253 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Gm10226O88253 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.27□□□□□ -0.61
Gm10226O88253 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10226O88253 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Gm10226O88253 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10226O88253 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10226O88253 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10226O88253 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10226O88253 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10226O88253 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10226O88253 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10226O88253 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10226O88253 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10226O88253 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10226O88253 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC11.26□□□□□ -0.61
Gm10226O88253 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10226O88253 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Gm10226O88253 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10226O88253 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.26□□□□□ -0.61
Gm10226O88253 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.26□□□□□ -0.61
Gm10226O88253 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10226O88253 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10226O88253 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.26□□□□□ -0.61
Gm10226O88253 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.26□□□□□ -0.61
Gm10226O88253 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.26□□□□□ -0.61
Gm10226O88253 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Gm10226O88253 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10226O88253 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.26□□□□□ -0.61
Gm10226O88253 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10226O88253 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Gm10226O88253 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10226O88253 Gm9867-201ENSMUST00000192212 2647 ntBASIC11.26□□□□□ -0.61
Gm10226O88253 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Gm10226O88253 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.26□□□□□ -0.61
Gm10226O88253 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Gm10226O88253 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10226O88253 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Gm10226O88253 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10226O88253 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10226O88253 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10226O88253 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10226O88253 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10226O88253 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10226O88253 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm10226O88253 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Gm10226O88253 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10226O88253 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.25□□□□□ -0.61
Gm10226O88253 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10226O88253 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10226O88253 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10226O88253 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10226O88253 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10226O88253 Gm29340-201ENSMUST00000188763 3854 ntBASIC11.25□□□□□ -0.61
Gm10226O88253 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Gm10226O88253 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Gm10226O88253 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10226O88253 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.25□□□□□ -0.61
Gm10226O88253 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10226O88253 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10226O88253 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10226O88253 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Gm10226O88253 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10226O88253 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10226O88253 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10226O88253 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10226O88253 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.25□□□□□ -0.61
Gm10226O88253 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.25□□□□□ -0.61
Gm10226O88253 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10226O88253 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10226O88253 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10226O88253 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10226O88253 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Gm10226O88253 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Gm10226O88253 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Gm10226O88253 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10226O88253 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Gm10226O88253 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10226O88253 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Gm10226O88253 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10226O88253 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10226O88253 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10226O88253 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm10226O88253 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms