Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ubr1O70481 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ubr1O70481 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ubr1O70481 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.68■□□□□ 0.58
Ubr1O70481 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ubr1O70481 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ubr1O70481 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ubr1O70481 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ubr1O70481 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ubr1O70481 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC18.68■□□□□ 0.58
Ubr1O70481 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ubr1O70481 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.68■□□□□ 0.58
Ubr1O70481 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ubr1O70481 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ubr1O70481 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.68■□□□□ 0.58
Ubr1O70481 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC18.68■□□□□ 0.58
Ubr1O70481 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ubr1O70481 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ubr1O70481 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ubr1O70481 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ubr1O70481 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC18.68■□□□□ 0.58
Ubr1O70481 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Ubr1O70481 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Ubr1O70481 Gm4984-201ENSMUST00000115987 360 ntBASIC18.68■□□□□ 0.58
Ubr1O70481 Gm12416-201ENSMUST00000120911 1008 ntBASIC18.68■□□□□ 0.58
Ubr1O70481 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC18.68■□□□□ 0.58
Ubr1O70481 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ubr1O70481 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ubr1O70481 Gm8598-201ENSMUST00000221184 836 ntBASIC18.68■□□□□ 0.58
Ubr1O70481 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ubr1O70481 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ubr1O70481 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ubr1O70481 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.67■□□□□ 0.58
Ubr1O70481 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC18.67■□□□□ 0.58
Ubr1O70481 AC115735.4-201ENSMUST00000227460 1944 ntBASIC18.67■□□□□ 0.58
Ubr1O70481 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ubr1O70481 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ubr1O70481 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ubr1O70481 Mir692-1-201ENSMUST00000102263 109 ntBASIC18.67■□□□□ 0.58
Ubr1O70481 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC18.67■□□□□ 0.58
Ubr1O70481 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC18.67■□□□□ 0.58
Ubr1O70481 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC18.67■□□□□ 0.58
Ubr1O70481 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Ubr1O70481 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ubr1O70481 Gm6244-201ENSMUST00000178732 841 ntBASIC18.67■□□□□ 0.58
Ubr1O70481 Gm27839-201ENSMUST00000184242 106 ntBASIC18.67■□□□□ 0.58
Ubr1O70481 Gm27892-201ENSMUST00000185017 106 ntBASIC18.67■□□□□ 0.58
Ubr1O70481 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ubr1O70481 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ubr1O70481 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ubr1O70481 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ubr1O70481 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubr1O70481 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubr1O70481 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
Ubr1O70481 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ubr1O70481 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ubr1O70481 Ighv1-51-201ENSMUST00000192903 354 ntBASIC18.66■□□□□ 0.58
Ubr1O70481 AC110817.1-201ENSMUST00000225706 605 ntBASIC18.66■□□□□ 0.58
Ubr1O70481 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubr1O70481 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubr1O70481 AC161252.3-201ENSMUST00000225465 1549 ntBASIC18.66■□□□□ 0.58
Ubr1O70481 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubr1O70481 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubr1O70481 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ubr1O70481 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubr1O70481 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubr1O70481 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ubr1O70481 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubr1O70481 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubr1O70481 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubr1O70481 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubr1O70481 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubr1O70481 Gm13226-201ENSMUST00000117838 404 ntBASIC18.65■□□□□ 0.58
Ubr1O70481 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC18.65■□□□□ 0.58
Ubr1O70481 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC18.65■□□□□ 0.58
Ubr1O70481 Gm6007-201ENSMUST00000208170 823 ntBASIC18.65■□□□□ 0.58
Ubr1O70481 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC18.65■□□□□ 0.58
Ubr1O70481 AC125117.1-201ENSMUST00000228121 468 ntBASIC18.65■□□□□ 0.58
Ubr1O70481 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubr1O70481 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubr1O70481 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ubr1O70481 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ubr1O70481 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubr1O70481 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.65■□□□□ 0.58
Ubr1O70481 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ubr1O70481 AC121801.1-201ENSMUST00000225363 1899 ntBASIC18.65■□□□□ 0.58
Ubr1O70481 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubr1O70481 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ubr1O70481 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ubr1O70481 Gm11425-201ENSMUST00000119608 498 ntBASIC18.65■□□□□ 0.58
Ubr1O70481 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubr1O70481 AC192088.1-201ENSMUST00000227561 301 ntBASIC18.65■□□□□ 0.58
Ubr1O70481 AC150560.1-201ENSMUST00000227731 1187 ntBASIC18.65■□□□□ 0.58
Ubr1O70481 Gm9396-201ENSMUST00000076703 567 ntBASIC18.65■□□□□ 0.58
Ubr1O70481 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ubr1O70481 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ubr1O70481 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubr1O70481 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ubr1O70481 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ubr1O70481 Gm21038-201ENSMUST00000222205 1383 ntBASIC18.64■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms