Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim1O70400 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.45□□□□□ -0.1
Pdlim1O70400 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim1O70400 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Pdlim1O70400 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim1O70400 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pdlim1O70400 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pdlim1O70400 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim1O70400 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.45□□□□□ -0.1
Pdlim1O70400 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim1O70400 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim1O70400 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.44□□□□□ -0.1
Pdlim1O70400 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.44□□□□□ -0.1
Pdlim1O70400 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.44□□□□□ -0.1
Pdlim1O70400 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim1O70400 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pdlim1O70400 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim1O70400 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.44□□□□□ -0.1
Pdlim1O70400 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pdlim1O70400 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim1O70400 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.44□□□□□ -0.1
Pdlim1O70400 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.44□□□□□ -0.1
Pdlim1O70400 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pdlim1O70400 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim1O70400 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim1O70400 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim1O70400 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim1O70400 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim1O70400 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim1O70400 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim1O70400 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim1O70400 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim1O70400 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.44□□□□□ -0.1
Pdlim1O70400 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.44□□□□□ -0.1
Pdlim1O70400 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.44□□□□□ -0.1
Pdlim1O70400 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.44□□□□□ -0.1
Pdlim1O70400 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim1O70400 Gm8396-201ENSMUST00000057361 823 ntBASIC14.44□□□□□ -0.1
Pdlim1O70400 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Pdlim1O70400 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim1O70400 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim1O70400 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim1O70400 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim1O70400 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim1O70400 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim1O70400 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.44□□□□□ -0.1
Pdlim1O70400 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim1O70400 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim1O70400 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim1O70400 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim1O70400 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim1O70400 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim1O70400 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pdlim1O70400 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim1O70400 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pdlim1O70400 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.44□□□□□ -0.1
Pdlim1O70400 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.44□□□□□ -0.1
Pdlim1O70400 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim1O70400 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pdlim1O70400 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Carlr-201ENSMUST00000181515 2574 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.43□□□□□ -0.1
Pdlim1O70400 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Pdlim1O70400 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm22065-201ENSMUST00000103753 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm22066-201ENSMUST00000103761 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm24932-201ENSMUST00000103763 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm24115-201ENSMUST00000103799 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm22190-201ENSMUST00000103827 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm22191-201ENSMUST00000103831 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm24721-201ENSMUST00000103849 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm28018-201ENSMUST00000103869 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm26399-201ENSMUST00000103937 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pdlim1O70400 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm14042-201ENSMUST00000120139 833 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm25349-201ENSMUST00000177728 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm23616-201ENSMUST00000177797 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm25871-201ENSMUST00000177816 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm24752-201ENSMUST00000178240 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm24496-201ENSMUST00000178287 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm25649-201ENSMUST00000178476 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm25548-201ENSMUST00000178681 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm23147-201ENSMUST00000178841 110 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms