Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.55□□□□□ -0.56
Pde6dO55057 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pde6dO55057 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pde6dO55057 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.54□□□□□ -0.56
Pde6dO55057 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pde6dO55057 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pde6dO55057 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Pde6dO55057 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Pde6dO55057 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Pde6dO55057 Gm11355-201ENSMUST00000121120 306 ntBASIC11.54□□□□□ -0.56
Pde6dO55057 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pde6dO55057 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.54□□□□□ -0.56
Pde6dO55057 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pde6dO55057 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.54□□□□□ -0.56
Pde6dO55057 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.54□□□□□ -0.56
Pde6dO55057 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pde6dO55057 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.54□□□□□ -0.56
Pde6dO55057 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Pde6dO55057 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pde6dO55057 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pde6dO55057 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pde6dO55057 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Pde6dO55057 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.54□□□□□ -0.56
Pde6dO55057 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pde6dO55057 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pde6dO55057 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pde6dO55057 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pde6dO55057 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.54□□□□□ -0.56
Pde6dO55057 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Pde6dO55057 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.54□□□□□ -0.56
Pde6dO55057 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pde6dO55057 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pde6dO55057 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pde6dO55057 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pde6dO55057 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pde6dO55057 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pde6dO55057 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pde6dO55057 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Pde6dO55057 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pde6dO55057 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Pde6dO55057 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pde6dO55057 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.53□□□□□ -0.56
Pde6dO55057 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pde6dO55057 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pde6dO55057 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pde6dO55057 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Pde6dO55057 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Pde6dO55057 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pde6dO55057 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pde6dO55057 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Pde6dO55057 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pde6dO55057 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pde6dO55057 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.53□□□□□ -0.56
Pde6dO55057 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC11.53□□□□□ -0.56
Pde6dO55057 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Pde6dO55057 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pde6dO55057 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pde6dO55057 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pde6dO55057 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pde6dO55057 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pde6dO55057 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pde6dO55057 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.53□□□□□ -0.56
Pde6dO55057 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.53□□□□□ -0.56
Pde6dO55057 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pde6dO55057 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pde6dO55057 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC11.53□□□□□ -0.56
Pde6dO55057 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pde6dO55057 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pde6dO55057 Matn2-206ENSMUST00000228570 2798 ntBASIC11.53□□□□□ -0.56
Pde6dO55057 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Pde6dO55057 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.53□□□□□ -0.56
Pde6dO55057 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Pde6dO55057 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Pde6dO55057 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Pde6dO55057 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Pde6dO55057 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pde6dO55057 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pde6dO55057 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Pde6dO55057 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pde6dO55057 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pde6dO55057 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pde6dO55057 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pde6dO55057 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pde6dO55057 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pde6dO55057 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pde6dO55057 Gm29361-201ENSMUST00000183323 2000 ntBASIC11.52□□□□□ -0.56
Pde6dO55057 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.52□□□□□ -0.56
Pde6dO55057 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pde6dO55057 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.52□□□□□ -0.57
Pde6dO55057 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pde6dO55057 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Pde6dO55057 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Pde6dO55057 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Pde6dO55057 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pde6dO55057 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pde6dO55057 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pde6dO55057 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pde6dO55057 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pde6dO55057 Mir5130-201ENSMUST00000175160 84 ntBASIC11.52□□□□□ -0.57
Pde6dO55057 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms