Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.04■□□□□ 0.16
Trdmt1O55055 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trdmt1O55055 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trdmt1O55055 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trdmt1O55055 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trdmt1O55055 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trdmt1O55055 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trdmt1O55055 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trdmt1O55055 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.04■□□□□ 0.16
Trdmt1O55055 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.04■□□□□ 0.16
Trdmt1O55055 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.04■□□□□ 0.16
Trdmt1O55055 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trdmt1O55055 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.04■□□□□ 0.16
Trdmt1O55055 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trdmt1O55055 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trdmt1O55055 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trdmt1O55055 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trdmt1O55055 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.04■□□□□ 0.16
Trdmt1O55055 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trdmt1O55055 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.04■□□□□ 0.16
Trdmt1O55055 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdmt1O55055 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdmt1O55055 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdmt1O55055 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trdmt1O55055 BC037039-201ENSMUST00000192003 2205 ntBASIC16.03■□□□□ 0.16
Trdmt1O55055 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdmt1O55055 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
Trdmt1O55055 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trdmt1O55055 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.03■□□□□ 0.16
Trdmt1O55055 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdmt1O55055 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trdmt1O55055 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdmt1O55055 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trdmt1O55055 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.03■□□□□ 0.16
Trdmt1O55055 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.03■□□□□ 0.16
Trdmt1O55055 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trdmt1O55055 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdmt1O55055 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trdmt1O55055 Gm25857-201ENSMUST00000082788 129 ntBASIC16.03■□□□□ 0.16
Trdmt1O55055 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdmt1O55055 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdmt1O55055 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Trdmt1O55055 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdmt1O55055 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdmt1O55055 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trdmt1O55055 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdmt1O55055 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdmt1O55055 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdmt1O55055 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdmt1O55055 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trdmt1O55055 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdmt1O55055 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdmt1O55055 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdmt1O55055 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdmt1O55055 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trdmt1O55055 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.03■□□□□ 0.16
Trdmt1O55055 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdmt1O55055 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdmt1O55055 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trdmt1O55055 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trdmt1O55055 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trdmt1O55055 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trdmt1O55055 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trdmt1O55055 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trdmt1O55055 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.02■□□□□ 0.16
Trdmt1O55055 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trdmt1O55055 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trdmt1O55055 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trdmt1O55055 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.02■□□□□ 0.16
Trdmt1O55055 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trdmt1O55055 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.02■□□□□ 0.16
Trdmt1O55055 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Trdmt1O55055 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trdmt1O55055 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trdmt1O55055 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trdmt1O55055 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.02■□□□□ 0.16
Trdmt1O55055 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trdmt1O55055 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.02■□□□□ 0.16
Trdmt1O55055 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.02■□□□□ 0.16
Trdmt1O55055 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.02■□□□□ 0.16
Trdmt1O55055 Gm19220-201ENSMUST00000222682 803 ntBASIC16.02■□□□□ 0.16
Trdmt1O55055 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trdmt1O55055 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trdmt1O55055 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trdmt1O55055 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
Trdmt1O55055 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.02■□□□□ 0.15
Trdmt1O55055 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trdmt1O55055 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Trdmt1O55055 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trdmt1O55055 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trdmt1O55055 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trdmt1O55055 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Trdmt1O55055 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trdmt1O55055 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Trdmt1O55055 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.02■□□□□ 0.15
Trdmt1O55055 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trdmt1O55055 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trdmt1O55055 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trdmt1O55055 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.01■□□□□ 0.15
Trdmt1O55055 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms