Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC13.18□□□□□ -0.3
Dkk1O54908 Gm18547-201ENSMUST00000192439 811 ntBASIC13.18□□□□□ -0.3
Dkk1O54908 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Dkk1O54908 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dkk1O54908 Gm8637-201ENSMUST00000212919 1085 ntBASIC13.18□□□□□ -0.3
Dkk1O54908 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Dkk1O54908 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dkk1O54908 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dkk1O54908 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dkk1O54908 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Dkk1O54908 Gm15590-201ENSMUST00000078419 552 ntBASIC13.18□□□□□ -0.3
Dkk1O54908 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Dkk1O54908 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dkk1O54908 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dkk1O54908 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dkk1O54908 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Dkk1O54908 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.18□□□□□ -0.3
Dkk1O54908 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Dkk1O54908 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dkk1O54908 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.18□□□□□ -0.3
Dkk1O54908 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dkk1O54908 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Dkk1O54908 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dkk1O54908 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Dkk1O54908 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dkk1O54908 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dkk1O54908 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dkk1O54908 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dkk1O54908 2810403D21Rik-209ENSMUST00000207966 1433 ntTSL 5 BASIC13.17□□□□□ -0.3
Dkk1O54908 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dkk1O54908 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.17□□□□□ -0.3
Dkk1O54908 Gm15379-201ENSMUST00000121224 648 ntBASIC13.17□□□□□ -0.3
Dkk1O54908 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.17□□□□□ -0.3
Dkk1O54908 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.17□□□□□ -0.3
Dkk1O54908 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.17□□□□□ -0.3
Dkk1O54908 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Dkk1O54908 Gm18358-201ENSMUST00000173179 1277 ntBASIC13.17□□□□□ -0.3
Dkk1O54908 Gm18733-201ENSMUST00000173950 856 ntBASIC13.17□□□□□ -0.3
Dkk1O54908 Gm27628-201ENSMUST00000184911 107 ntBASIC13.17□□□□□ -0.3
Dkk1O54908 Gm43104-201ENSMUST00000197234 311 ntBASIC13.17□□□□□ -0.3
Dkk1O54908 Gm43815-201ENSMUST00000197676 990 ntBASIC13.17□□□□□ -0.3
Dkk1O54908 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC13.17□□□□□ -0.3
Dkk1O54908 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Dkk1O54908 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC13.17□□□□□ -0.3
Dkk1O54908 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Dkk1O54908 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dkk1O54908 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dkk1O54908 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Dkk1O54908 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Dkk1O54908 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dkk1O54908 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Dkk1O54908 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dkk1O54908 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dkk1O54908 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Dkk1O54908 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dkk1O54908 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dkk1O54908 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Dkk1O54908 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dkk1O54908 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dkk1O54908 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Dkk1O54908 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dkk1O54908 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Dkk1O54908 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.16□□□□□ -0.3
Dkk1O54908 Gm42995-201ENSMUST00000197047 1330 ntBASIC13.16□□□□□ -0.3
Dkk1O54908 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dkk1O54908 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dkk1O54908 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dkk1O54908 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dkk1O54908 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.16□□□□□ -0.3
Dkk1O54908 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.16□□□□□ -0.3
Dkk1O54908 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dkk1O54908 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dkk1O54908 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Dkk1O54908 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Dkk1O54908 Gm25317-201ENSMUST00000116824 129 ntBASIC13.16□□□□□ -0.3
Dkk1O54908 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC13.16□□□□□ -0.3
Dkk1O54908 Gm6806-201ENSMUST00000120092 1006 ntBASIC13.16□□□□□ -0.3
Dkk1O54908 Gm15166-201ENSMUST00000120790 385 ntBASIC13.16□□□□□ -0.3
Dkk1O54908 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dkk1O54908 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Dkk1O54908 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Dkk1O54908 Gm4899-201ENSMUST00000178708 719 ntBASIC13.16□□□□□ -0.3
Dkk1O54908 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.16□□□□□ -0.3
Dkk1O54908 Gm37355-201ENSMUST00000193345 606 ntBASIC13.16□□□□□ -0.3
Dkk1O54908 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.16□□□□□ -0.3
Dkk1O54908 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.16□□□□□ -0.3
Dkk1O54908 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.16□□□□□ -0.3
Dkk1O54908 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.16□□□□□ -0.3
Dkk1O54908 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dkk1O54908 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Dkk1O54908 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.16□□□□□ -0.3
Dkk1O54908 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dkk1O54908 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dkk1O54908 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dkk1O54908 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Dkk1O54908 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dkk1O54908 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.16□□□□□ -0.3
Dkk1O54908 Mir124-2hg-204ENSMUST00000188983 1365 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Dkk1O54908 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dkk1O54908 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms