Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm2O35900 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.02□□□□□ -0.33
Lsm2O35900 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm2O35900 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm2O35900 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm2O35900 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm2O35900 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm2O35900 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm2O35900 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm2O35900 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Lsm2O35900 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.02□□□□□ -0.33
Lsm2O35900 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm2O35900 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm2O35900 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm2O35900 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm2O35900 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.02□□□□□ -0.33
Lsm2O35900 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm2O35900 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm2O35900 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm2O35900 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm2O35900 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm2O35900 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Lsm2O35900 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm2O35900 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Lsm2O35900 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm2O35900 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm2O35900 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm2O35900 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm2O35900 Gm10231-201ENSMUST00000181584 441 ntBASIC13.01□□□□□ -0.33
Lsm2O35900 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm2O35900 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm2O35900 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm2O35900 Gm10175-202ENSMUST00000208752 441 ntBASIC13.01□□□□□ -0.33
Lsm2O35900 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.01□□□□□ -0.33
Lsm2O35900 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm2O35900 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm2O35900 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm2O35900 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Lsm2O35900 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm2O35900 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm2O35900 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm2O35900 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm2O35900 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.01□□□□□ -0.33
Lsm2O35900 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.01□□□□□ -0.33
Lsm2O35900 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm2O35900 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Lsm2O35900 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm2O35900 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm2O35900 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Lsm2O35900 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm2O35900 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm2O35900 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm2O35900 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm2O35900 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm2O35900 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm2O35900 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm2O35900 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm2O35900 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm2O35900 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm2O35900 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Lsm2O35900 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm2O35900 Gm38102-201ENSMUST00000192791 1935 ntBASIC13□□□□□ -0.33
Lsm2O35900 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm2O35900 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm2O35900 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm2O35900 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13□□□□□ -0.33
Lsm2O35900 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm2O35900 Gm11185-201ENSMUST00000117732 1007 ntBASIC13□□□□□ -0.33
Lsm2O35900 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm2O35900 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13□□□□□ -0.33
Lsm2O35900 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13□□□□□ -0.33
Lsm2O35900 CT010506.4-201ENSMUST00000225457 351 ntBASIC13□□□□□ -0.33
Lsm2O35900 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm2O35900 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm2O35900 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm2O35900 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm2O35900 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm2O35900 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm2O35900 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm2O35900 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Lsm2O35900 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13□□□□□ -0.33
Lsm2O35900 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm2O35900 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm2O35900 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Lsm2O35900 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm2O35900 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm2O35900 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm2O35900 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm2O35900 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm2O35900 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm2O35900 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm2O35900 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Lsm2O35900 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm2O35900 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm2O35900 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.99□□□□□ -0.33
Lsm2O35900 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.99□□□□□ -0.33
Lsm2O35900 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm2O35900 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lsm2O35900 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.99□□□□□ -0.33
Lsm2O35900 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms