Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nr1i3O35627 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nr1i3O35627 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nr1i3O35627 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nr1i3O35627 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nr1i3O35627 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.73■□□□□ 0.11
Nr1i3O35627 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nr1i3O35627 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Nr1i3O35627 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nr1i3O35627 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nr1i3O35627 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.73■□□□□ 0.11
Nr1i3O35627 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Nr1i3O35627 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Nr1i3O35627 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Nr1i3O35627 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
Nr1i3O35627 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
Nr1i3O35627 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nr1i3O35627 Thap2-203ENSMUST00000218989 527 ntBASIC15.73■□□□□ 0.11
Nr1i3O35627 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nr1i3O35627 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.73■□□□□ 0.11
Nr1i3O35627 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nr1i3O35627 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.73■□□□□ 0.11
Nr1i3O35627 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.73■□□□□ 0.11
Nr1i3O35627 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nr1i3O35627 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nr1i3O35627 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nr1i3O35627 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nr1i3O35627 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nr1i3O35627 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nr1i3O35627 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nr1i3O35627 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Nr1i3O35627 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nr1i3O35627 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nr1i3O35627 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nr1i3O35627 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Nr1i3O35627 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Nr1i3O35627 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nr1i3O35627 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nr1i3O35627 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Nr1i3O35627 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nr1i3O35627 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nr1i3O35627 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nr1i3O35627 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.72■□□□□ 0.11
Nr1i3O35627 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nr1i3O35627 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.72■□□□□ 0.11
Nr1i3O35627 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.72■□□□□ 0.11
Nr1i3O35627 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.72■□□□□ 0.11
Nr1i3O35627 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.72■□□□□ 0.11
Nr1i3O35627 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nr1i3O35627 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nr1i3O35627 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.72■□□□□ 0.11
Nr1i3O35627 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Nr1i3O35627 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Nr1i3O35627 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Nr1i3O35627 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nr1i3O35627 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Nr1i3O35627 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nr1i3O35627 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.72■□□□□ 0.11
Nr1i3O35627 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nr1i3O35627 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nr1i3O35627 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.72■□□□□ 0.11
Nr1i3O35627 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.72■□□□□ 0.11
Nr1i3O35627 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nr1i3O35627 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nr1i3O35627 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nr1i3O35627 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nr1i3O35627 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nr1i3O35627 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nr1i3O35627 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nr1i3O35627 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nr1i3O35627 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nr1i3O35627 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nr1i3O35627 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.71■□□□□ 0.11
Nr1i3O35627 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nr1i3O35627 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nr1i3O35627 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.71■□□□□ 0.11
Nr1i3O35627 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.71■□□□□ 0.11
Nr1i3O35627 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Nr1i3O35627 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nr1i3O35627 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nr1i3O35627 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nr1i3O35627 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Nr1i3O35627 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Nr1i3O35627 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nr1i3O35627 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Nr1i3O35627 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nr1i3O35627 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nr1i3O35627 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nr1i3O35627 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nr1i3O35627 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nr1i3O35627 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Nr1i3O35627 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Nr1i3O35627 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Nr1i3O35627 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nr1i3O35627 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nr1i3O35627 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nr1i3O35627 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nr1i3O35627 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nr1i3O35627 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.7■□□□□ 0.1
Nr1i3O35627 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms