Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Stx1aO35526 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Stx1aO35526 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Stx1aO35526 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Stx1aO35526 Gm14859-201ENSMUST00000117752 357 ntBASIC16.46■□□□□ 0.23
Stx1aO35526 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.46■□□□□ 0.23
Stx1aO35526 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Stx1aO35526 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.46■□□□□ 0.23
Stx1aO35526 Gm17807-201ENSMUST00000186869 298 ntBASIC16.46■□□□□ 0.23
Stx1aO35526 Gm44357-201ENSMUST00000195897 142 ntBASIC16.46■□□□□ 0.23
Stx1aO35526 Gm19658-201ENSMUST00000196231 138 ntBASIC16.46■□□□□ 0.23
Stx1aO35526 Gm44367-201ENSMUST00000196836 138 ntBASIC16.46■□□□□ 0.23
Stx1aO35526 Gm44350-201ENSMUST00000197197 138 ntBASIC16.46■□□□□ 0.23
Stx1aO35526 Gm44390-201ENSMUST00000197533 144 ntBASIC16.46■□□□□ 0.23
Stx1aO35526 Gm44313-201ENSMUST00000198018 138 ntBASIC16.46■□□□□ 0.23
Stx1aO35526 Gm44486-201ENSMUST00000198508 138 ntBASIC16.46■□□□□ 0.23
Stx1aO35526 Gm44314-201ENSMUST00000199263 138 ntBASIC16.46■□□□□ 0.23
Stx1aO35526 Gm44394-201ENSMUST00000199558 138 ntBASIC16.46■□□□□ 0.23
Stx1aO35526 Gm44484-201ENSMUST00000199873 138 ntBASIC16.46■□□□□ 0.23
Stx1aO35526 Gm44466-201ENSMUST00000200264 138 ntBASIC16.46■□□□□ 0.23
Stx1aO35526 Gm44359-201ENSMUST00000200671 138 ntBASIC16.46■□□□□ 0.23
Stx1aO35526 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Stx1aO35526 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Stx1aO35526 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.46■□□□□ 0.23
Stx1aO35526 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Stx1aO35526 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Stx1aO35526 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Stx1aO35526 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.46■□□□□ 0.23
Stx1aO35526 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.46■□□□□ 0.23
Stx1aO35526 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.46■□□□□ 0.23
Stx1aO35526 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Stx1aO35526 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Stx1aO35526 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Stx1aO35526 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Stx1aO35526 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Stx1aO35526 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Stx1aO35526 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Stx1aO35526 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stx1aO35526 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Stx1aO35526 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Stx1aO35526 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.45■□□□□ 0.22
Stx1aO35526 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stx1aO35526 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.45■□□□□ 0.22
Stx1aO35526 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stx1aO35526 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Stx1aO35526 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Stx1aO35526 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stx1aO35526 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stx1aO35526 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.45■□□□□ 0.22
Stx1aO35526 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stx1aO35526 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Stx1aO35526 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Stx1aO35526 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stx1aO35526 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.45■□□□□ 0.22
Stx1aO35526 Gm9726-201ENSMUST00000180321 678 ntBASIC16.45■□□□□ 0.22
Stx1aO35526 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.45■□□□□ 0.22
Stx1aO35526 Gm7787-201ENSMUST00000216858 688 ntBASIC16.45■□□□□ 0.22
Stx1aO35526 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stx1aO35526 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Stx1aO35526 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stx1aO35526 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Stx1aO35526 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Stx1aO35526 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Stx1aO35526 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stx1aO35526 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stx1aO35526 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stx1aO35526 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Stx1aO35526 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Stx1aO35526 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stx1aO35526 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Stx1aO35526 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stx1aO35526 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Stx1aO35526 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stx1aO35526 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stx1aO35526 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.45■□□□□ 0.22
Stx1aO35526 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Stx1aO35526 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
Stx1aO35526 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stx1aO35526 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Stx1aO35526 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stx1aO35526 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Stx1aO35526 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stx1aO35526 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Stx1aO35526 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stx1aO35526 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.44■□□□□ 0.22
Stx1aO35526 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stx1aO35526 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Stx1aO35526 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Stx1aO35526 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.44■□□□□ 0.22
Stx1aO35526 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.44■□□□□ 0.22
Stx1aO35526 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Stx1aO35526 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stx1aO35526 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stx1aO35526 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Stx1aO35526 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stx1aO35526 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stx1aO35526 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stx1aO35526 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stx1aO35526 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stx1aO35526 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms