Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfsf11O35235 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.43□□□□□ -0.58
Tnfsf11O35235 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Gm44454-201ENSMUST00000198541 138 ntBASIC11.43□□□□□ -0.58
Tnfsf11O35235 Gm17808-201ENSMUST00000200859 894 ntBASIC11.43□□□□□ -0.58
Tnfsf11O35235 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf11O35235 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.43□□□□□ -0.58
Tnfsf11O35235 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.43□□□□□ -0.58
Tnfsf11O35235 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.43□□□□□ -0.58
Tnfsf11O35235 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tnfsf11O35235 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf11O35235 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf11O35235 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf11O35235 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf11O35235 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf11O35235 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf11O35235 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf11O35235 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf11O35235 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf11O35235 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf11O35235 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf11O35235 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.42□□□□□ -0.58
Tnfsf11O35235 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Tnfsf11O35235 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf11O35235 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf11O35235 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf11O35235 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf11O35235 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf11O35235 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf11O35235 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf11O35235 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf11O35235 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf11O35235 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Tnfsf11O35235 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Tnfsf11O35235 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf11O35235 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf11O35235 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tnfsf11O35235 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Tnfsf11O35235 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Gm15794-201ENSMUST00000120182 631 ntBASIC11.41□□□□□ -0.58
Tnfsf11O35235 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms