Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Trove2O08848 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ 0
Trove2O08848 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trove2O08848 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trove2O08848 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Trove2O08848 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.05■□□□□ 0
Trove2O08848 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trove2O08848 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trove2O08848 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trove2O08848 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Trove2O08848 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trove2O08848 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trove2O08848 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trove2O08848 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trove2O08848 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Trove2O08848 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trove2O08848 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.05■□□□□ -0
Trove2O08848 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.05■□□□□ -0
Trove2O08848 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.05■□□□□ -0
Trove2O08848 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.05■□□□□ -0
Trove2O08848 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trove2O08848 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trove2O08848 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trove2O08848 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trove2O08848 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.05■□□□□ -0
Trove2O08848 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trove2O08848 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trove2O08848 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trove2O08848 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trove2O08848 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trove2O08848 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trove2O08848 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Trove2O08848 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trove2O08848 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trove2O08848 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trove2O08848 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trove2O08848 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trove2O08848 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trove2O08848 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trove2O08848 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trove2O08848 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trove2O08848 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trove2O08848 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trove2O08848 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trove2O08848 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trove2O08848 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trove2O08848 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trove2O08848 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trove2O08848 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trove2O08848 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trove2O08848 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC15.04■□□□□ -0
Trove2O08848 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trove2O08848 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.04■□□□□ -0
Trove2O08848 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trove2O08848 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trove2O08848 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trove2O08848 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trove2O08848 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.04■□□□□ -0
Trove2O08848 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trove2O08848 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trove2O08848 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trove2O08848 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trove2O08848 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Trove2O08848 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trove2O08848 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trove2O08848 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trove2O08848 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trove2O08848 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Trove2O08848 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Trove2O08848 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trove2O08848 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trove2O08848 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trove2O08848 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trove2O08848 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trove2O08848 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trove2O08848 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trove2O08848 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trove2O08848 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.03■□□□□ -0
Trove2O08848 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trove2O08848 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trove2O08848 Gm43347-201ENSMUST00000200226 580 ntBASIC15.03■□□□□ -0
Trove2O08848 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trove2O08848 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.03■□□□□ -0
Trove2O08848 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trove2O08848 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trove2O08848 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trove2O08848 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trove2O08848 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trove2O08848 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Trove2O08848 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trove2O08848 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trove2O08848 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trove2O08848 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trove2O08848 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trove2O08848 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.03■□□□□ -0
Trove2O08848 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trove2O08848 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trove2O08848 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trove2O08848 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trove2O08848 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms