Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
B020004C17RikJ3QP07 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC16.23■□□□□ 0.19
B020004C17RikJ3QP07 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
B020004C17RikJ3QP07 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
B020004C17RikJ3QP07 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
B020004C17RikJ3QP07 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.23■□□□□ 0.19
B020004C17RikJ3QP07 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.23■□□□□ 0.19
B020004C17RikJ3QP07 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
B020004C17RikJ3QP07 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
B020004C17RikJ3QP07 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
B020004C17RikJ3QP07 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
B020004C17RikJ3QP07 Gm9396-201ENSMUST00000076703 567 ntBASIC16.23■□□□□ 0.19
B020004C17RikJ3QP07 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
B020004C17RikJ3QP07 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
B020004C17RikJ3QP07 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
B020004C17RikJ3QP07 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
B020004C17RikJ3QP07 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
B020004C17RikJ3QP07 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
B020004C17RikJ3QP07 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
B020004C17RikJ3QP07 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
B020004C17RikJ3QP07 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
B020004C17RikJ3QP07 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
B020004C17RikJ3QP07 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
B020004C17RikJ3QP07 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
B020004C17RikJ3QP07 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
B020004C17RikJ3QP07 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Gm5356-201ENSMUST00000093326 615 ntBASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.22■□□□□ 0.19
B020004C17RikJ3QP07 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
B020004C17RikJ3QP07 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
B020004C17RikJ3QP07 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC16.21■□□□□ 0.19
B020004C17RikJ3QP07 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
B020004C17RikJ3QP07 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
B020004C17RikJ3QP07 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
B020004C17RikJ3QP07 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
B020004C17RikJ3QP07 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
B020004C17RikJ3QP07 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
B020004C17RikJ3QP07 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
B020004C17RikJ3QP07 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
B020004C17RikJ3QP07 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
B020004C17RikJ3QP07 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
B020004C17RikJ3QP07 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
B020004C17RikJ3QP07 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
B020004C17RikJ3QP07 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
B020004C17RikJ3QP07 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
B020004C17RikJ3QP07 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
B020004C17RikJ3QP07 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
B020004C17RikJ3QP07 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
B020004C17RikJ3QP07 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
B020004C17RikJ3QP07 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
B020004C17RikJ3QP07 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.21■□□□□ 0.19
B020004C17RikJ3QP07 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.21■□□□□ 0.18
B020004C17RikJ3QP07 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
B020004C17RikJ3QP07 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
B020004C17RikJ3QP07 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
B020004C17RikJ3QP07 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
B020004C17RikJ3QP07 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
B020004C17RikJ3QP07 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
B020004C17RikJ3QP07 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.2■□□□□ 0.18
B020004C17RikJ3QP07 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
B020004C17RikJ3QP07 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
B020004C17RikJ3QP07 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
B020004C17RikJ3QP07 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
B020004C17RikJ3QP07 Mir692-1-201ENSMUST00000102263 109 ntBASIC16.2■□□□□ 0.18
B020004C17RikJ3QP07 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
B020004C17RikJ3QP07 Mir1894-201ENSMUST00000122802 81 ntBASIC16.2■□□□□ 0.18
B020004C17RikJ3QP07 Mir1982-201ENSMUST00000157368 74 ntBASIC16.2■□□□□ 0.18
B020004C17RikJ3QP07 Gm6244-201ENSMUST00000178732 841 ntBASIC16.2■□□□□ 0.18
B020004C17RikJ3QP07 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms