Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-3J3QMG8 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Trav13d-3J3QMG8 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Trav13d-3J3QMG8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Trav13d-3J3QMG8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-3J3QMG8 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-3J3QMG8 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-3J3QMG8 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav13d-3J3QMG8 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav13d-3J3QMG8 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav13d-3J3QMG8 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav13d-3J3QMG8 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav13d-3J3QMG8 Gm43514-201ENSMUST00000198852 424 ntBASIC12.87□□□□□ -0.35
Trav13d-3J3QMG8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-3J3QMG8 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-3J3QMG8 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-3J3QMG8 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-3J3QMG8 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-3J3QMG8 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav13d-3J3QMG8 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-3J3QMG8 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-3J3QMG8 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav13d-3J3QMG8 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-3J3QMG8 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-3J3QMG8 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav13d-3J3QMG8 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-3J3QMG8 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-3J3QMG8 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav13d-3J3QMG8 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-3J3QMG8 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms