Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Gm5682-201ENSMUST00000173402 505 ntBASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Gm37153-201ENSMUST00000193637 231 ntBASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.18□□□□□ -0.3
Pcdh1F7BJK1 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdh1F7BJK1 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh1F7BJK1 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh1F7BJK1 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh1F7BJK1 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh1F7BJK1 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdh1F7BJK1 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh1F7BJK1 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh1F7BJK1 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh1F7BJK1 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdh1F7BJK1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh1F7BJK1 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Pcdh1F7BJK1 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdh1F7BJK1 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.17□□□□□ -0.3
Pcdh1F7BJK1 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh1F7BJK1 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh1F7BJK1 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh1F7BJK1 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Pcdh1F7BJK1 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh1F7BJK1 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Pcdh1F7BJK1 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdh1F7BJK1 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh1F7BJK1 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh1F7BJK1 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdh1F7BJK1 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh1F7BJK1 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Gm8749-201ENSMUST00000117737 331 ntBASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms