Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC18.56■□□□□ 0.56
Scn7aB1AYL1 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn7aB1AYL1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn7aB1AYL1 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn7aB1AYL1 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Scn7aB1AYL1 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn7aB1AYL1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.55■□□□□ 0.56
Scn7aB1AYL1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn7aB1AYL1 Gm11425-201ENSMUST00000119608 498 ntBASIC18.55■□□□□ 0.56
Scn7aB1AYL1 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn7aB1AYL1 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn7aB1AYL1 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC18.55■□□□□ 0.56
Scn7aB1AYL1 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC18.55■□□□□ 0.56
Scn7aB1AYL1 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC18.55■□□□□ 0.56
Scn7aB1AYL1 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn7aB1AYL1 Gm9396-201ENSMUST00000076703 567 ntBASIC18.55■□□□□ 0.56
Scn7aB1AYL1 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn7aB1AYL1 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn7aB1AYL1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn7aB1AYL1 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn7aB1AYL1 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn7aB1AYL1 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn7aB1AYL1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Scn7aB1AYL1 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn7aB1AYL1 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn7aB1AYL1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn7aB1AYL1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn7aB1AYL1 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC18.54■□□□□ 0.56
Scn7aB1AYL1 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn7aB1AYL1 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC18.54■□□□□ 0.56
Scn7aB1AYL1 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn7aB1AYL1 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC18.54■□□□□ 0.56
Scn7aB1AYL1 Gm43094-201ENSMUST00000196549 921 ntBASIC18.54■□□□□ 0.56
Scn7aB1AYL1 AC156560.2-201ENSMUST00000221232 264 ntBASIC18.54■□□□□ 0.56
Scn7aB1AYL1 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn7aB1AYL1 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn7aB1AYL1 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC18.54■□□□□ 0.56
Scn7aB1AYL1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn7aB1AYL1 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn7aB1AYL1 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn7aB1AYL1 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn7aB1AYL1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn7aB1AYL1 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn7aB1AYL1 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn7aB1AYL1 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn7aB1AYL1 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn7aB1AYL1 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn7aB1AYL1 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC18.54■□□□□ 0.56
Scn7aB1AYL1 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
Scn7aB1AYL1 Gm8062-201ENSMUST00000139696 444 ntBASIC18.54■□□□□ 0.56
Scn7aB1AYL1 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Scn7aB1AYL1 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scn7aB1AYL1 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scn7aB1AYL1 Gm13859-201ENSMUST00000119936 1423 ntBASIC18.53■□□□□ 0.56
Scn7aB1AYL1 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Scn7aB1AYL1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn7aB1AYL1 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scn7aB1AYL1 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn7aB1AYL1 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC18.53■□□□□ 0.56
Scn7aB1AYL1 Gm14730-201ENSMUST00000122378 1045 ntBASIC18.53■□□□□ 0.56
Scn7aB1AYL1 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC18.53■□□□□ 0.56
Scn7aB1AYL1 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC18.53■□□□□ 0.56
Scn7aB1AYL1 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scn7aB1AYL1 Gm7498-201ENSMUST00000203282 1084 ntBASIC18.53■□□□□ 0.56
Scn7aB1AYL1 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn7aB1AYL1 Gm10584-201ENSMUST00000207036 2628 ntBASIC18.53■□□□□ 0.56
Scn7aB1AYL1 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Scn7aB1AYL1 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Scn7aB1AYL1 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn7aB1AYL1 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Scn7aB1AYL1 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn7aB1AYL1 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn7aB1AYL1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn7aB1AYL1 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC18.52■□□□□ 0.56
Scn7aB1AYL1 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Scn7aB1AYL1 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Scn7aB1AYL1 Gm8835-201ENSMUST00000173096 1169 ntBASIC18.52■□□□□ 0.56
Scn7aB1AYL1 Gm29741-201ENSMUST00000192667 421 ntBASIC18.52■□□□□ 0.56
Scn7aB1AYL1 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Scn7aB1AYL1 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn7aB1AYL1 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn7aB1AYL1 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn7aB1AYL1 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn7aB1AYL1 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Scn7aB1AYL1 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Scn7aB1AYL1 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Scn7aB1AYL1 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scn7aB1AYL1 Fbxl12-205ENSMUST00000140702 1555 ntBASIC18.52■□□□□ 0.55
Scn7aB1AYL1 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn7aB1AYL1 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn7aB1AYL1 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC18.51■□□□□ 0.55
Scn7aB1AYL1 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scn7aB1AYL1 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC18.51■□□□□ 0.55
Scn7aB1AYL1 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scn7aB1AYL1 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn7aB1AYL1 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn7aB1AYL1 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Scn7aB1AYL1 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn7aB1AYL1 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn7aB1AYL1 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms