Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a6B1AVK5 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a6B1AVK5 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a6B1AVK5 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a6B1AVK5 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a6B1AVK5 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a6B1AVK5 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a6B1AVK5 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a6B1AVK5 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a6B1AVK5 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a6B1AVK5 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.8□□□□□ -0.04
Col4a6B1AVK5 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.8□□□□□ -0.04
Col4a6B1AVK5 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a6B1AVK5 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a6B1AVK5 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Col4a6B1AVK5 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.8□□□□□ -0.04
Col4a6B1AVK5 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Col4a6B1AVK5 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.8□□□□□ -0.04
Col4a6B1AVK5 Gm29127-201ENSMUST00000188304 517 ntBASIC14.8□□□□□ -0.04
Col4a6B1AVK5 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
Col4a6B1AVK5 Gm42693-201ENSMUST00000196779 631 ntBASIC14.8□□□□□ -0.04
Col4a6B1AVK5 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.8□□□□□ -0.04
Col4a6B1AVK5 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a6B1AVK5 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a6B1AVK5 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.8□□□□□ -0.04
Col4a6B1AVK5 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a6B1AVK5 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a6B1AVK5 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a6B1AVK5 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.8□□□□□ -0.04
Col4a6B1AVK5 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.79□□□□□ -0.04
Col4a6B1AVK5 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.79□□□□□ -0.04
Col4a6B1AVK5 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.79□□□□□ -0.04
Col4a6B1AVK5 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col4a6B1AVK5 Carlr-201ENSMUST00000181515 2574 ntBASIC14.79□□□□□ -0.04
Col4a6B1AVK5 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col4a6B1AVK5 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Col4a6B1AVK5 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col4a6B1AVK5 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col4a6B1AVK5 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.79□□□□□ -0.04
Col4a6B1AVK5 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Col4a6B1AVK5 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col4a6B1AVK5 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.79□□□□□ -0.04
Col4a6B1AVK5 Gm12928-201ENSMUST00000117115 573 ntBASIC14.79□□□□□ -0.04
Col4a6B1AVK5 Gm15198-201ENSMUST00000117283 177 ntBASIC14.79□□□□□ -0.04
Col4a6B1AVK5 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col4a6B1AVK5 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.79□□□□□ -0.04
Col4a6B1AVK5 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.79□□□□□ -0.04
Col4a6B1AVK5 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.79□□□□□ -0.04
Col4a6B1AVK5 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col4a6B1AVK5 Gm6091-201ENSMUST00000098307 165 ntBASIC14.79□□□□□ -0.04
Col4a6B1AVK5 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col4a6B1AVK5 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Col4a6B1AVK5 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a6B1AVK5 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a6B1AVK5 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Col4a6B1AVK5 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a6B1AVK5 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Col4a6B1AVK5 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a6B1AVK5 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a6B1AVK5 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.78□□□□□ -0.04
Col4a6B1AVK5 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.78□□□□□ -0.04
Col4a6B1AVK5 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.78□□□□□ -0.04
Col4a6B1AVK5 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.78□□□□□ -0.04
Col4a6B1AVK5 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.78□□□□□ -0.04
Col4a6B1AVK5 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a6B1AVK5 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Col4a6B1AVK5 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a6B1AVK5 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a6B1AVK5 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a6B1AVK5 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a6B1AVK5 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a6B1AVK5 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Col4a6B1AVK5 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a6B1AVK5 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a6B1AVK5 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.78□□□□□ -0.04
Col4a6B1AVK5 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a6B1AVK5 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a6B1AVK5 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a6B1AVK5 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a6B1AVK5 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.78□□□□□ -0.04
Col4a6B1AVK5 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a6B1AVK5 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col4a6B1AVK5 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.78□□□□□ -0.04
Col4a6B1AVK5 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col4a6B1AVK5 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
Col4a6B1AVK5 Gm13612-201ENSMUST00000119276 390 ntBASIC14.77□□□□□ -0.04
Col4a6B1AVK5 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.77□□□□□ -0.04
Col4a6B1AVK5 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.77□□□□□ -0.04
Col4a6B1AVK5 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.77□□□□□ -0.04
Col4a6B1AVK5 Gm27731-201ENSMUST00000185192 107 ntBASIC14.77□□□□□ -0.04
Col4a6B1AVK5 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.77□□□□□ -0.04
Col4a6B1AVK5 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Col4a6B1AVK5 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col4a6B1AVK5 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col4a6B1AVK5 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col4a6B1AVK5 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col4a6B1AVK5 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.77□□□□□ -0.04
Col4a6B1AVK5 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.77□□□□□ -0.04
Col4a6B1AVK5 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col4a6B1AVK5 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms