Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Col6a5A6H584 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col6a5A6H584 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.92□□□□□ -0.66
Col6a5A6H584 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Col6a5A6H584 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a5A6H584 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Col6a5A6H584 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC10.92□□□□□ -0.66
Col6a5A6H584 Gm6621-201ENSMUST00000193251 772 ntBASIC10.92□□□□□ -0.66
Col6a5A6H584 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a5A6H584 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a5A6H584 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a5A6H584 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a5A6H584 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Col6a5A6H584 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a5A6H584 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a5A6H584 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a5A6H584 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a5A6H584 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a5A6H584 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Col6a5A6H584 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a5A6H584 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Col6a5A6H584 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a5A6H584 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a5A6H584 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a5A6H584 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Col6a5A6H584 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.92□□□□□ -0.66
Col6a5A6H584 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.92□□□□□ -0.66
Col6a5A6H584 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a5A6H584 Gm37230-201ENSMUST00000194491 818 ntBASIC10.92□□□□□ -0.66
Col6a5A6H584 Gm18905-201ENSMUST00000205454 928 ntBASIC10.92□□□□□ -0.66
Col6a5A6H584 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a5A6H584 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a5A6H584 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a5A6H584 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a5A6H584 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC10.92□□□□□ -0.66
Col6a5A6H584 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a5A6H584 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a5A6H584 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.92□□□□□ -0.66
Col6a5A6H584 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a5A6H584 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a5A6H584 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a5A6H584 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a5A6H584 Tfap2a-203ENSMUST00000223869 2037 ntBASIC10.91□□□□□ -0.66
Col6a5A6H584 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a5A6H584 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.91□□□□□ -0.66
Col6a5A6H584 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a5A6H584 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC10.91□□□□□ -0.66
Col6a5A6H584 Gm17376-201ENSMUST00000166016 84 ntBASIC10.91□□□□□ -0.66
Col6a5A6H584 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a5A6H584 Olfr284-202ENSMUST00000206647 966 ntBASIC10.91□□□□□ -0.66
Col6a5A6H584 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a5A6H584 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a5A6H584 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a5A6H584 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Col6a5A6H584 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a5A6H584 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a5A6H584 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a5A6H584 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a5A6H584 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC10.91□□□□□ -0.66
Col6a5A6H584 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a5A6H584 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a5A6H584 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Col6a5A6H584 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a5A6H584 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a5A6H584 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a5A6H584 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a5A6H584 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a5A6H584 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a5A6H584 Gm8213-201ENSMUST00000118191 441 ntBASIC10.91□□□□□ -0.66
Col6a5A6H584 Gm6152-201ENSMUST00000151704 340 ntBASIC10.91□□□□□ -0.66
Col6a5A6H584 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a5A6H584 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a5A6H584 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Col6a5A6H584 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC10.91□□□□□ -0.66
Col6a5A6H584 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a5A6H584 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Col6a5A6H584 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a5A6H584 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a5A6H584 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Col6a5A6H584 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a5A6H584 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a5A6H584 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a5A6H584 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a5A6H584 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a5A6H584 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Col6a5A6H584 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a5A6H584 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC10.9□□□□□ -0.66
Col6a5A6H584 Gm15376-201ENSMUST00000122258 783 ntBASIC10.9□□□□□ -0.66
Col6a5A6H584 Gm10156-201ENSMUST00000122364 462 ntBASIC10.9□□□□□ -0.66
Col6a5A6H584 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC10.9□□□□□ -0.66
Col6a5A6H584 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC10.9□□□□□ -0.66
Col6a5A6H584 Mir5120-201ENSMUST00000175020 78 ntBASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms