Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm24255-201ENSMUST00000104481 128 ntBASIC11.74□□□□□ -0.53
Chd6A3KFM7 Gm9550-201ENSMUST00000161130 862 ntBASIC11.74□□□□□ -0.53
Chd6A3KFM7 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Chd6A3KFM7 Mir6927-201ENSMUST00000184494 71 ntBASIC11.74□□□□□ -0.53
Chd6A3KFM7 Gm2260-201ENSMUST00000184965 657 ntBASIC11.74□□□□□ -0.53
Chd6A3KFM7 Gm18584-201ENSMUST00000203098 964 ntBASIC11.74□□□□□ -0.53
Chd6A3KFM7 Gm29705-201ENSMUST00000212598 474 ntBASIC11.74□□□□□ -0.53
Chd6A3KFM7 Gm10752-201ENSMUST00000218348 729 ntBASIC11.74□□□□□ -0.53
Chd6A3KFM7 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd6A3KFM7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Chd6A3KFM7 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd6A3KFM7 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC11.74□□□□□ -0.53
Chd6A3KFM7 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.74□□□□□ -0.53
Chd6A3KFM7 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd6A3KFM7 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chd6A3KFM7 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd6A3KFM7 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd6A3KFM7 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd6A3KFM7 Gm12616-201ENSMUST00000118594 382 ntBASIC11.74□□□□□ -0.53
Chd6A3KFM7 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd6A3KFM7 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.74□□□□□ -0.53
Chd6A3KFM7 Gm12624-201ENSMUST00000177615 382 ntBASIC11.74□□□□□ -0.53
Chd6A3KFM7 Gm12621-201ENSMUST00000177760 382 ntBASIC11.74□□□□□ -0.53
Chd6A3KFM7 Gm12615-201ENSMUST00000177970 382 ntBASIC11.74□□□□□ -0.53
Chd6A3KFM7 Gm12622-201ENSMUST00000177975 382 ntBASIC11.74□□□□□ -0.53
Chd6A3KFM7 Gm12627-201ENSMUST00000178412 382 ntBASIC11.74□□□□□ -0.53
Chd6A3KFM7 Gm12625-201ENSMUST00000179122 382 ntBASIC11.74□□□□□ -0.53
Chd6A3KFM7 Gm12614-201ENSMUST00000179586 382 ntBASIC11.74□□□□□ -0.53
Chd6A3KFM7 Gm12613-201ENSMUST00000180323 382 ntBASIC11.74□□□□□ -0.53
Chd6A3KFM7 Gm4804-201ENSMUST00000182234 999 ntBASIC11.74□□□□□ -0.53
Chd6A3KFM7 Gm5051-201ENSMUST00000204085 485 ntBASIC11.74□□□□□ -0.53
Chd6A3KFM7 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd6A3KFM7 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd6A3KFM7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC11.74□□□□□ -0.53
Chd6A3KFM7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Chd6A3KFM7 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd6A3KFM7 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd6A3KFM7 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd6A3KFM7 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd6A3KFM7 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd6A3KFM7 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd6A3KFM7 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd6A3KFM7 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chd6A3KFM7 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.73□□□□□ -0.53
Chd6A3KFM7 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Gm27320-201ENSMUST00000184892 109 ntBASIC11.73□□□□□ -0.53
Chd6A3KFM7 Gm33320-201ENSMUST00000192232 530 ntBASIC11.73□□□□□ -0.53
Chd6A3KFM7 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.73□□□□□ -0.53
Chd6A3KFM7 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.73□□□□□ -0.53
Chd6A3KFM7 AC160980.1-201ENSMUST00000224136 970 ntBASIC11.73□□□□□ -0.53
Chd6A3KFM7 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.73□□□□□ -0.53
Chd6A3KFM7 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Chd6A3KFM7 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.73□□□□□ -0.53
Chd6A3KFM7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Gm19078-201ENSMUST00000206311 727 ntBASIC11.73□□□□□ -0.53
Chd6A3KFM7 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.73□□□□□ -0.53
Chd6A3KFM7 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Gm25668-201ENSMUST00000157700 129 ntBASIC11.73□□□□□ -0.53
Chd6A3KFM7 Gm5479-201ENSMUST00000160578 435 ntBASIC11.73□□□□□ -0.53
Chd6A3KFM7 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.73□□□□□ -0.53
Chd6A3KFM7 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd6A3KFM7 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Chd6A3KFM7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chd6A3KFM7 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd6A3KFM7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd6A3KFM7 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd6A3KFM7 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms