Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn1aA2APX8 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn1aA2APX8 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn1aA2APX8 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn1aA2APX8 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.27■□□□□ 0.04
Scn1aA2APX8 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Scn1aA2APX8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn1aA2APX8 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.27■□□□□ 0.04
Scn1aA2APX8 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn1aA2APX8 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn1aA2APX8 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn1aA2APX8 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Scn1aA2APX8 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Scn1aA2APX8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Scn1aA2APX8 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.27■□□□□ 0.03
Scn1aA2APX8 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.27■□□□□ 0.03
Scn1aA2APX8 Gm9063-201ENSMUST00000223299 582 ntBASIC15.27■□□□□ 0.03
Scn1aA2APX8 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.27■□□□□ 0.03
Scn1aA2APX8 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.27■□□□□ 0.03
Scn1aA2APX8 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Scn1aA2APX8 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn1aA2APX8 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn1aA2APX8 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Scn1aA2APX8 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn1aA2APX8 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Scn1aA2APX8 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn1aA2APX8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn1aA2APX8 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn1aA2APX8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn1aA2APX8 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn1aA2APX8 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn1aA2APX8 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.27■□□□□ 0.03
Scn1aA2APX8 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Scn1aA2APX8 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn1aA2APX8 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn1aA2APX8 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn1aA2APX8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn1aA2APX8 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Scn1aA2APX8 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scn1aA2APX8 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
Scn1aA2APX8 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scn1aA2APX8 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Scn1aA2APX8 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.26■□□□□ 0.03
Scn1aA2APX8 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Scn1aA2APX8 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.26■□□□□ 0.03
Scn1aA2APX8 Gm45453-201ENSMUST00000211758 853 ntBASIC15.26■□□□□ 0.03
Scn1aA2APX8 Gm7730-201ENSMUST00000212486 454 ntBASIC15.26■□□□□ 0.03
Scn1aA2APX8 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scn1aA2APX8 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.26■□□□□ 0.03
Scn1aA2APX8 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn1aA2APX8 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn1aA2APX8 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Scn1aA2APX8 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn1aA2APX8 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scn1aA2APX8 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Scn1aA2APX8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn1aA2APX8 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scn1aA2APX8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Scn1aA2APX8 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scn1aA2APX8 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Scn1aA2APX8 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Scn1aA2APX8 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn1aA2APX8 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Scn1aA2APX8 Mir1897-201ENSMUST00000122581 272 ntBASIC15.26■□□□□ 0.03
Scn1aA2APX8 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn1aA2APX8 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scn1aA2APX8 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.26■□□□□ 0.03
Scn1aA2APX8 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Scn1aA2APX8 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scn1aA2APX8 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn1aA2APX8 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn1aA2APX8 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn1aA2APX8 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn1aA2APX8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scn1aA2APX8 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn1aA2APX8 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn1aA2APX8 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Scn1aA2APX8 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn1aA2APX8 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scn1aA2APX8 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Scn1aA2APX8 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn1aA2APX8 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn1aA2APX8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn1aA2APX8 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn1aA2APX8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.25■□□□□ 0.03
Scn1aA2APX8 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn1aA2APX8 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn1aA2APX8 Gm14057-201ENSMUST00000120631 482 ntBASIC15.25■□□□□ 0.03
Scn1aA2APX8 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Scn1aA2APX8 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.25■□□□□ 0.03
Scn1aA2APX8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn1aA2APX8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn1aA2APX8 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scn1aA2APX8 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn1aA2APX8 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Scn1aA2APX8 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Scn1aA2APX8 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn1aA2APX8 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.25■□□□□ 0.03
Scn1aA2APX8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn1aA2APX8 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms