Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Ubr4A2AN08 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ubr4A2AN08 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC7.56□□□□□ -1.2
Ubr4A2AN08 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ubr4A2AN08 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ubr4A2AN08 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ubr4A2AN08 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ubr4A2AN08 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ubr4A2AN08 Gm4986-201ENSMUST00000119731 549 ntBASIC7.56□□□□□ -1.2
Ubr4A2AN08 Gm14726-201ENSMUST00000120623 896 ntBASIC7.56□□□□□ -1.2
Ubr4A2AN08 Gm26927-201ENSMUST00000182385 965 ntBASIC7.56□□□□□ -1.2
Ubr4A2AN08 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC7.56□□□□□ -1.2
Ubr4A2AN08 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC7.56□□□□□ -1.2
Ubr4A2AN08 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ubr4A2AN08 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ubr4A2AN08 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ubr4A2AN08 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC7.56□□□□□ -1.2
Ubr4A2AN08 Gm21038-201ENSMUST00000222205 1383 ntBASIC7.56□□□□□ -1.2
Ubr4A2AN08 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ubr4A2AN08 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ubr4A2AN08 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ubr4A2AN08 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC7.56□□□□□ -1.2
Ubr4A2AN08 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC7.56□□□□□ -1.2
Ubr4A2AN08 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ubr4A2AN08 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ubr4A2AN08 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ubr4A2AN08 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ubr4A2AN08 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Gm11354-201ENSMUST00000121974 422 ntBASIC7.55□□□□□ -1.2
Ubr4A2AN08 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Dancr-204ENSMUST00000132389 2347 ntBASIC7.55□□□□□ -1.2
Ubr4A2AN08 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Gm6983-201ENSMUST00000214912 628 ntBASIC7.55□□□□□ -1.2
Ubr4A2AN08 Morn2-202ENSMUST00000227729 656 ntBASIC7.55□□□□□ -1.2
Ubr4A2AN08 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC7.55□□□□□ -1.2
Ubr4A2AN08 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 AA914427-201ENSMUST00000193194 1166 ntBASIC7.55□□□□□ -1.2
Ubr4A2AN08 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Gm13286-201ENSMUST00000117750 537 ntBASIC7.55□□□□□ -1.2
Ubr4A2AN08 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC7.55□□□□□ -1.2
Ubr4A2AN08 Gm28450-201ENSMUST00000187349 638 ntBASIC7.55□□□□□ -1.2
Ubr4A2AN08 Gm28324-201ENSMUST00000187913 264 ntBASIC7.55□□□□□ -1.2
Ubr4A2AN08 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Ubr4A2AN08 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Mir671-201ENSMUST00000102432 98 ntBASIC7.54□□□□□ -1.2
Ubr4A2AN08 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC7.54□□□□□ -1.2
Ubr4A2AN08 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Gm16342-201ENSMUST00000124025 1025 ntBASIC7.54□□□□□ -1.2
Ubr4A2AN08 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Gm31256-201ENSMUST00000194705 506 ntBASIC7.54□□□□□ -1.2
Ubr4A2AN08 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC7.54□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms