Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Gm13464-201ENSMUST00000119418 935 ntBASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Gm27459-201ENSMUST00000184860 107 ntBASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Gm34391-201ENSMUST00000203706 907 ntBASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Gm6376-201ENSMUST00000209407 580 ntBASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav12-1A0N8R1 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12-1A0N8R1 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav12-1A0N8R1 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12-1A0N8R1 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12-1A0N8R1 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12-1A0N8R1 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12-1A0N8R1 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.21□□□□□ -0.45
Trav12-1A0N8R1 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12-1A0N8R1 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.21□□□□□ -0.45
Trav12-1A0N8R1 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12-1A0N8R1 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12-1A0N8R1 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12-1A0N8R1 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12-1A0N8R1 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12-1A0N8R1 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms