Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Gm6089-201ENSMUST00000197666 938 ntBASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-1A0N8R0 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12d-1A0N8R0 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12d-1A0N8R0 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.77□□□□□ -0.52
Trav12d-1A0N8R0 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12d-1A0N8R0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12d-1A0N8R0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12d-1A0N8R0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12d-1A0N8R0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12d-1A0N8R0 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Trav12d-1A0N8R0 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12d-1A0N8R0 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12d-1A0N8R0 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12d-1A0N8R0 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12d-1A0N8R0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12d-1A0N8R0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12d-1A0N8R0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12d-1A0N8R0 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12d-1A0N8R0 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12d-1A0N8R0 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-1A0N8R0 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-1A0N8R0 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-1A0N8R0 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-1A0N8R0 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-1A0N8R0 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Trav12d-1A0N8R0 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-1A0N8R0 Gm13418-201ENSMUST00000119097 944 ntBASIC11.77□□□□□ -0.53
Trav12d-1A0N8R0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Trav12d-1A0N8R0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav12d-1A0N8R0 Gm5682-201ENSMUST00000173402 505 ntBASIC11.77□□□□□ -0.53
Trav12d-1A0N8R0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-1A0N8R0 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-1A0N8R0 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-1A0N8R0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-1A0N8R0 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.77□□□□□ -0.53
Trav12d-1A0N8R0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-1A0N8R0 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-1A0N8R0 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-1A0N8R0 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav12d-1A0N8R0 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.77□□□□□ -0.53
Trav12d-1A0N8R0 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav12d-1A0N8R0 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms