Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc194A0A140LIT1 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.58□□□□□ -0.07
Ccdc194A0A140LIT1 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc194A0A140LIT1 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc194A0A140LIT1 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc194A0A140LIT1 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc194A0A140LIT1 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc194A0A140LIT1 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc194A0A140LIT1 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Ccdc194A0A140LIT1 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc194A0A140LIT1 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc194A0A140LIT1 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Ccdc194A0A140LIT1 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc194A0A140LIT1 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Ccdc194A0A140LIT1 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc194A0A140LIT1 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc194A0A140LIT1 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.58□□□□□ -0.08
Ccdc194A0A140LIT1 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Ccdc194A0A140LIT1 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.58□□□□□ -0.08
Ccdc194A0A140LIT1 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.58□□□□□ -0.08
Ccdc194A0A140LIT1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.58□□□□□ -0.08
Ccdc194A0A140LIT1 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc194A0A140LIT1 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.58□□□□□ -0.08
Ccdc194A0A140LIT1 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.58□□□□□ -0.08
Ccdc194A0A140LIT1 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.58□□□□□ -0.08
Ccdc194A0A140LIT1 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc194A0A140LIT1 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc194A0A140LIT1 Gm10819-201ENSMUST00000099988 561 ntBASIC14.58□□□□□ -0.08
Ccdc194A0A140LIT1 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc194A0A140LIT1 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc194A0A140LIT1 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc194A0A140LIT1 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc194A0A140LIT1 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc194A0A140LIT1 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc194A0A140LIT1 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc194A0A140LIT1 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ccdc194A0A140LIT1 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc194A0A140LIT1 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc194A0A140LIT1 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Ccdc194A0A140LIT1 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ccdc194A0A140LIT1 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc194A0A140LIT1 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 Gm13884-201ENSMUST00000118103 829 ntBASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc194A0A140LIT1 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Ccdc194A0A140LIT1 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc194A0A140LIT1 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.56□□□□□ -0.08
Ccdc194A0A140LIT1 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc194A0A140LIT1 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.56□□□□□ -0.08
Ccdc194A0A140LIT1 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc194A0A140LIT1 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ccdc194A0A140LIT1 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Ccdc194A0A140LIT1 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.56□□□□□ -0.08
Ccdc194A0A140LIT1 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ccdc194A0A140LIT1 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.56□□□□□ -0.08
Ccdc194A0A140LIT1 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc194A0A140LIT1 Gm13036-201ENSMUST00000117799 748 ntBASIC14.56□□□□□ -0.08
Ccdc194A0A140LIT1 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc194A0A140LIT1 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc194A0A140LIT1 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.56□□□□□ -0.08
Ccdc194A0A140LIT1 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.56□□□□□ -0.08
Ccdc194A0A140LIT1 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc194A0A140LIT1 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.56□□□□□ -0.08
Ccdc194A0A140LIT1 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.56□□□□□ -0.08
Ccdc194A0A140LIT1 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc194A0A140LIT1 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc194A0A140LIT1 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc194A0A140LIT1 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.56□□□□□ -0.08
Ccdc194A0A140LIT1 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ccdc194A0A140LIT1 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Ccdc194A0A140LIT1 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms