Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gm13597-201ENSMUST00000121239 375 ntBASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gm15593-201ENSMUST00000122085 1008 ntBASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Mir7036b-201ENSMUST00000184791 63 ntBASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gm43509-201ENSMUST00000196551 2594 ntBASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gm14140-201ENSMUST00000119999 995 ntBASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC10.65□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms