Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav6-4A0A075B6B4 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav6-4A0A075B6B4 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav6-4A0A075B6B4 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Trav6-4A0A075B6B4 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.6
Trav6-4A0A075B6B4 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.27□□□□□ -0.6
Trav6-4A0A075B6B4 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6-4A0A075B6B4 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6-4A0A075B6B4 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6-4A0A075B6B4 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6-4A0A075B6B4 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6-4A0A075B6B4 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav6-4A0A075B6B4 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6-4A0A075B6B4 Gm13464-201ENSMUST00000119418 935 ntBASIC11.27□□□□□ -0.61
Trav6-4A0A075B6B4 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav6-4A0A075B6B4 Gm11025-201ENSMUST00000140773 466 ntBASIC11.27□□□□□ -0.61
Trav6-4A0A075B6B4 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.27□□□□□ -0.61
Trav6-4A0A075B6B4 Rpph1-201ENSMUST00000175096 319 ntBASIC11.27□□□□□ -0.61
Trav6-4A0A075B6B4 Gm9726-201ENSMUST00000180321 678 ntBASIC11.27□□□□□ -0.61
Trav6-4A0A075B6B4 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6-4A0A075B6B4 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.27□□□□□ -0.61
Trav6-4A0A075B6B4 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6-4A0A075B6B4 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav6-4A0A075B6B4 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6-4A0A075B6B4 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6-4A0A075B6B4 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6-4A0A075B6B4 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.61
Trav6-4A0A075B6B4 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6-4A0A075B6B4 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav6-4A0A075B6B4 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Gm11543-201ENSMUST00000120758 370 ntBASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav6-4A0A075B6B4 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6-4A0A075B6B4 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav6-4A0A075B6B4 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6-4A0A075B6B4 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6-4A0A075B6B4 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav6-4A0A075B6B4 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6-4A0A075B6B4 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.25□□□□□ -0.61
Trav6-4A0A075B6B4 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6-4A0A075B6B4 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6-4A0A075B6B4 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav6-4A0A075B6B4 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav6-4A0A075B6B4 Gm8749-201ENSMUST00000117737 331 ntBASIC11.25□□□□□ -0.61
Trav6-4A0A075B6B4 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms