Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav6n-6A0A075B6B2 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Trav6n-6A0A075B6B2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav6n-6A0A075B6B2 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav6n-6A0A075B6B2 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav6n-6A0A075B6B2 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav6n-6A0A075B6B2 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav6n-6A0A075B6B2 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav6n-6A0A075B6B2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav6n-6A0A075B6B2 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav6n-6A0A075B6B2 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC10.96□□□□□ -0.66
Trav6n-6A0A075B6B2 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav6n-6A0A075B6B2 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC10.96□□□□□ -0.66
Trav6n-6A0A075B6B2 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav6n-6A0A075B6B2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav6n-6A0A075B6B2 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Gm8349-201ENSMUST00000182720 1003 ntBASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Gm27459-201ENSMUST00000184860 107 ntBASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Vti1a-206ENSMUST00000225529 1244 ntBASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trav6n-6A0A075B6B2 Gm37844-201ENSMUST00000192473 4097 ntBASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Gm43056-201ENSMUST00000197865 2791 ntBASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Gm28659-201ENSMUST00000188013 759 ntBASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Gm44645-201ENSMUST00000205492 1653 ntBASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Gm30238-201ENSMUST00000195528 2603 ntBASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav6n-6A0A075B6B2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms